| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0600 |
|---|
| Symbol | |
|---|
| ID | 4080628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 608902 |
|---|
| End bp | 610176 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638008959 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_615654 |
|---|
| Protein GI | 103486093 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.171137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA GTTTTCCGCC CCCTTCCGCC TTACGCGATT TCCTCGAAAG CGAGAGCGCA
GGCGGGATCC TGCTTATTTT CGCAGCCATT TTGGCAATGA TTGTTGCCAA TTCACCGCTG
GCGACGCTGT ATCACGACCT GATCCATGCC GTGACGGGAC CGGTTCTGAC CGACAAGCTC
GGCCCGATGA CGGTGCATCT TTGGATCAAC GACGGGCTGA TGGCGGTGTT TTTCCTGCTC
GTCGGGCTGG AGATCAAGCG CGAGTTCGTC GATGGACGGC TGGCGAGCTG GGATCGCCGA
CGCCTGCCCT TCATCGCCGC CGCCGCCGGC ATGGCGGTGC CCGCCGCGCT TTATATGTTT
TTCGTCGGCG ACGAGCCCGG TCTGGCGCAG GGCTGGGCGA TTCCCGCAGC GACCGACATC
GCCTTTGCGA TGGGCGTGCT CGCGCTGCTC GGCAGGCGCG CGCCGACCTC GCTCAAGCTA
TTCCTCGTCA CTGTCGCGAT CGTCGATGAC ATGGGCGCGG TCGCGATCAT CGCGCTTTTC
TATACCGCCA AGATCAACCT GCTCGCGCTC GGCGCCGCGG CGGCGATCCT TGGCATCATG
TTCGCGTGCA ACCGTGGCGG CGTGAAGAAC CTGCTCGTCT ATATGGCGCT CTTCCTGCTG
CTCTGGTATG CGATGCTGCT GTCGGGCGTC CATGCGACGA TCGCCGGCGT GCTCGCAGCA
ATGGCCATCC CTTTCGAGCG CACGCCGGGC GCGCCCGACA GTCAGACCTC GCCGCTGCAC
CGGCTCGAAC ATGCGCTGCA CCCGACGGTT GCCTTTGCCA TCGTGCCGCT GTTCGGCTTC
GCCAATGCGG GCGTCGATGT GCGTGCGCTG GGGCTCGACC AGCTCTTTGC GCCCCTGCCG
CTCGGCATCG CCGCGGGATT GTTCCTCGGC AAGCAGATCG GCATTTTCGG CAGCGTCTGG
CTGGCGGTCA AACTCGGCAT CGCGGGGAGA CTGCGCGGCG CGACCTGGCT CCAGGTCTAT
GCCGTCTCCA TGCTGTGCGG GATCGGTTTC ACGATGAGCC TGTTCATCGG CAGCCTCGCC
TTTCCCGGCA ACGCGCTGCT GATCGAGGAG GCGAAGATCG GTATCCTGAT GGGATCGCTC
GCATCGGCGC TCGTCGGCTT TGCCGTGCTG CGCCTCGCCC CGCTCCATCC CGAACATAAT
GCCGTCGAAT CGGCATCGAA AGGCGAAATT GCCGTCGACG GCGACGTGCG CGACACGTCC
GAAGCGGCCC GCTAG
|
|---|
| Protein sequence | MARSFPPPSA LRDFLESESA GGILLIFAAI LAMIVANSPL ATLYHDLIHA VTGPVLTDKL
GPMTVHLWIN DGLMAVFFLL VGLEIKREFV DGRLASWDRR RLPFIAAAAG MAVPAALYMF
FVGDEPGLAQ GWAIPAATDI AFAMGVLALL GRRAPTSLKL FLVTVAIVDD MGAVAIIALF
YTAKINLLAL GAAAAILGIM FACNRGGVKN LLVYMALFLL LWYAMLLSGV HATIAGVLAA
MAIPFERTPG APDSQTSPLH RLEHALHPTV AFAIVPLFGF ANAGVDVRAL GLDQLFAPLP
LGIAAGLFLG KQIGIFGSVW LAVKLGIAGR LRGATWLQVY AVSMLCGIGF TMSLFIGSLA
FPGNALLIEE AKIGILMGSL ASALVGFAVL RLAPLHPEHN AVESASKGEI AVDGDVRDTS
EAAR
|
|---|
| |