Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0598 |
Symbol | |
ID | 4080626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 606733 |
End bp | 607476 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008957 |
Product | hypothetical protein |
Protein accession | YP_615652 |
Protein GI | 103486091 |
COG category | [R] General function prediction only |
COG ID | [COG4798] Predicted methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.17906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTT CGCTGACCCT TGCCCTGCTG CTCGCCGCGG GCCCGCTCGC CGCGGCGCAG ACGGCCGCTC CCGACTATGC CGCGGCGCTC GCCGATCCCG CGCGTCCCGC CGCCGACCGG GCCCGCGACG CCGAGCGCAA GCCGGCCGAG CTGCTCGCGT TCGCCGAAAT CGCGCCGGGC GAGAAGGTCG GCGATTTCGT CATGGGGAGC GGCTATGTCA CGCGCCTGCT CGCCGCCGCG GTCGGCCCGG CGGGCAAGGT TTATGCCTTC CAGCCCGCCG AGTTCATCGC CTTCCGCAAA CAATATGGCG ACGACCAGGC AGCGGTCGAT GCCGCCTATG ACAATGTCGA TGCGGTCGGC GGACCGTTCG CGGCGCCCGC CTTTCCCGAA CCGCTCGACA CGATCGTCAC CGTCCAGAAC TTCCACGATC TCTACCTCAA ACCCTTTCCC GAAGGCACGG GCGCCAGGGG GAGCGCGGCG CTGTTCGCCG CGCTGAAACC GGGCGGCACG CTGGTCGTCG TCGATCATAG CGCGCCGGGC GGCAGCGGCA CGGCGCTGTC CGACAGCCTG CACCGGATCG ACAAGGCGGC GGTGGTCGCG GCGCTGACCG GCGCCGGCTT CACGCTCGAG GCCGAAAGCG ACCTCTATGC CCGCGTCGAC GATCCGCGCA CCGCCAATGT TTTCGACGCG GCGATTCGCG GCAAGACCGA CCAGTTCACG CTGCGTTTCC GCAAGCCGGG GTGA
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Protein sequence | MIRSLTLALL LAAGPLAAAQ TAAPDYAAAL ADPARPAADR ARDAERKPAE LLAFAEIAPG EKVGDFVMGS GYVTRLLAAA VGPAGKVYAF QPAEFIAFRK QYGDDQAAVD AAYDNVDAVG GPFAAPAFPE PLDTIVTVQN FHDLYLKPFP EGTGARGSAA LFAALKPGGT LVVVDHSAPG GSGTALSDSL HRIDKAAVVA ALTGAGFTLE AESDLYARVD DPRTANVFDA AIRGKTDQFT LRFRKPG
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