Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0593 |
Symbol | |
ID | 4080620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 601416 |
End bp | 602165 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008951 |
Product | hypothetical protein |
Protein accession | YP_615647 |
Protein GI | 103486086 |
COG category | [S] Function unknown |
COG ID | [COG1738] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CGCCCGCCTC GCCGACACCG CCCGTTCATG TGAACGCCGC GAGCGTCCGC CATTTTCGCT ATTACGACCT GTTGATGGCG GCTTTTGTCG CCATCCTGCT CTTGTCGAAC ATCATCGGCG CGTCGAAACC GAGCTATGTC GTGTTGCCGG ACGGCAGCGA ATGGGCTTTC GGTGCGGGGG TGCTGTTCTT TCCGATCAGT TACATCATCG GCGACGTGCT GACCGAAGTT TACGGCTATG CCCGCGCGCG GCGGGTGATC TGGACGGGCT TTGCCGCGCT GGCCTTCATG GCGTTCATGG CGTGGGCGGT CGTGTCGCTG CCGCCCGCCG ACGGCTGGCC GGGGCAGGCG GCCTATGAGT TCGTGTTCGG GAACAGCTGG CGCATCGTGC TCGCGTCGAT GACCGCCTTC TGGGTCGGCG AGTTCGCCAA CTCCTATGTG CTCGCGCGCA TGAAGCTGTG GACGCGCGGG CGCTTTCTGT GGATGCGCAC CATTGGGTCC ACTGTGGTCG GTCAGGGACT GGACAGCCTG ATTTTCTATC CGCTCGCCTT CTATGGGCTT GCCGGCTGGC CGCCCGAACA GCTGTATCAG GTCGTGCTGT CGCAATGGCT GATCAAAACT TTGTGGGAAG CGGCGCTGAC GCCGGTAACC TATGTCGTGG TTGGTGCGTT GAAGCGGCGC GAAGGTGTCG ACGTGTTCGA CGAAGGCACC GATTTCACGC CCTTTGCCGC CAAGGTCTGA
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Protein sequence | MTDTPASPTP PVHVNAASVR HFRYYDLLMA AFVAILLLSN IIGASKPSYV VLPDGSEWAF GAGVLFFPIS YIIGDVLTEV YGYARARRVI WTGFAALAFM AFMAWAVVSL PPADGWPGQA AYEFVFGNSW RIVLASMTAF WVGEFANSYV LARMKLWTRG RFLWMRTIGS TVVGQGLDSL IFYPLAFYGL AGWPPEQLYQ VVLSQWLIKT LWEAALTPVT YVVVGALKRR EGVDVFDEGT DFTPFAAKV
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