Gene Sala_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0593 
Symbol 
ID4080620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp601416 
End bp602165 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID638008951 
Producthypothetical protein 
Protein accessionYP_615647 
Protein GI103486086 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGCCCGCCTC GCCGACACCG CCCGTTCATG TGAACGCCGC GAGCGTCCGC 
CATTTTCGCT ATTACGACCT GTTGATGGCG GCTTTTGTCG CCATCCTGCT CTTGTCGAAC
ATCATCGGCG CGTCGAAACC GAGCTATGTC GTGTTGCCGG ACGGCAGCGA ATGGGCTTTC
GGTGCGGGGG TGCTGTTCTT TCCGATCAGT TACATCATCG GCGACGTGCT GACCGAAGTT
TACGGCTATG CCCGCGCGCG GCGGGTGATC TGGACGGGCT TTGCCGCGCT GGCCTTCATG
GCGTTCATGG CGTGGGCGGT CGTGTCGCTG CCGCCCGCCG ACGGCTGGCC GGGGCAGGCG
GCCTATGAGT TCGTGTTCGG GAACAGCTGG CGCATCGTGC TCGCGTCGAT GACCGCCTTC
TGGGTCGGCG AGTTCGCCAA CTCCTATGTG CTCGCGCGCA TGAAGCTGTG GACGCGCGGG
CGCTTTCTGT GGATGCGCAC CATTGGGTCC ACTGTGGTCG GTCAGGGACT GGACAGCCTG
ATTTTCTATC CGCTCGCCTT CTATGGGCTT GCCGGCTGGC CGCCCGAACA GCTGTATCAG
GTCGTGCTGT CGCAATGGCT GATCAAAACT TTGTGGGAAG CGGCGCTGAC GCCGGTAACC
TATGTCGTGG TTGGTGCGTT GAAGCGGCGC GAAGGTGTCG ACGTGTTCGA CGAAGGCACC
GATTTCACGC CCTTTGCCGC CAAGGTCTGA
 
Protein sequence
MTDTPASPTP PVHVNAASVR HFRYYDLLMA AFVAILLLSN IIGASKPSYV VLPDGSEWAF 
GAGVLFFPIS YIIGDVLTEV YGYARARRVI WTGFAALAFM AFMAWAVVSL PPADGWPGQA
AYEFVFGNSW RIVLASMTAF WVGEFANSYV LARMKLWTRG RFLWMRTIGS TVVGQGLDSL
IFYPLAFYGL AGWPPEQLYQ VVLSQWLIKT LWEAALTPVT YVVVGALKRR EGVDVFDEGT
DFTPFAAKV