Gene Sala_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0588 
Symbol 
ID4080615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp599209 
End bp599691 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID638008946 
Productbacterioferritin 
Protein accessionYP_615642 
Protein GI103486081 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID[TIGR00754] bacterioferritin 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.865953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.942884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCG ACGAAAAGGT CATCGACTTC CTCAACGAGG CGCTGAAGAA CGAGCTGACC 
GCGATCAACC AGTATTGGCT GCATTACCGG ATGCTCGACA ATTGGGGCGT CGCGCGCCTT
GCGCATTTCG AGCGCGAAGA GTCGATCGAC GAGATGAAGC ACGCCGACAA GCTGGCGGAC
CGCATCCTCT TCCTCGGCGG CCTTCCCAAT TTCCAGCTGC TCGGCCGCCT GCGCGTCGGC
GAGACGGTCG AGGAAATATT GAAGGCCGAC CTTGCGCTGG AAGAAGAGGC GATCCCGCTG
CTCAAGGACG CGATCGCGCA TTCGGAAAGC GTGCGCGACT ATGTGAGCCG CGACCTGTTC
GCCGACATCC TCGAAAGCGA GGAGCATCAT GTCGACGAGC TGGAAAAGCA GTTCGAGATG
ATCGAGCGCA TGGGCATCGA AAATTATATC CAGCTCCAGT CGAAGCCGGC CGGGGACGAT
TGA
 
Protein sequence
MKGDEKVIDF LNEALKNELT AINQYWLHYR MLDNWGVARL AHFEREESID EMKHADKLAD 
RILFLGGLPN FQLLGRLRVG ETVEEILKAD LALEEEAIPL LKDAIAHSES VRDYVSRDLF
ADILESEEHH VDELEKQFEM IERMGIENYI QLQSKPAGDD