| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0585 |
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| Symbol | |
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| ID | 4080612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 595191 |
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| End bp | 598082 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638008943 |
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| Product | peptidase M16-like protein |
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| Protein accession | YP_615639 |
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| Protein GI | 103486078 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.201942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.922639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC TTATTCTCCG GCGCGCCGCC ACCGCGCTCT TACCCTTCGC GCTTCTCGCC
GTCTGCTCGC CGCCGCTGCT TGCCAAGGAG GTCGAACGGC CCGCGGCGAC CGCCGCGGTC
AATCCGCAAG GCGACGCCGC AAGGGCATGG AACTTCGCCG CGAGCGACGT GCCGGTCGAT
CCCGGAACGA TTTTTGGCGT GCTTCCGAAT GGCATGAAAT ATGCGCTGCT GAAAAACAGC
ACGCCCAGGG ATAGCGTCGT CATCCGGATG CGCCTCGATG TCGGCAGCTT TGCCGAGGCC
GACGACCAGC GCGGCCTCGC CCATTTCCTC GAACATATGG CATTCAACGG ATCGACCAAC
GTGCCCGAGG GCGAGATGAT CAAGCTGCTC GAACGCAAGG GGCTGGCGTT CGGCGCCGAC
ACCAACGCCT CGACCGGGTT CGACGAGACC ATCTACAAGC TCGACCTGCC GAACGCTTCC
GACGATTTGA TCGACACCGG GCTGATGCTG ATGCGCGAGA CGGCGAGCGA ACTGACGCTC
GATTCCGCCG CGATCGACCG CGAACGCGGC ATCATCCTCT CCGAACGGCG CGCGCGCGAC
ACCTATCAAC TCCGCAACAT CGTCGACCAG CTCGATTTCC AGATGCAGGG CATGATTGTC
GCCGACCGTC TGCCCATCGG CACCGAGGCG GTGATCCGCA CCGCCCCCGC GTCGCGTCTG
CGCGACCTTT ACGAGCGCTA TTACCGTCCC GAACGCGCGA CGCTGGTGAT GGTCGGCGAC
TTCGACCCCG CGGCGGTCGA GGCGAAGATC AAGGCGCGTT TTGCGGACTG GACCGGGAAG
GGGCCGGCGG GGGTCGATCC CGACATCGGC GCCATCGACT ATGCCCGTCC CGCGGCCGCC
GACGATTTCG TCGATCCCGC GATCCAGGAT TCGGTGACGC TCGCCGCCTT CCGCCCATGG
GTCGACGAGC CCGACACCAG GGCGAAGCGC GCGCGCCTGA TCGCCGAAAA TATCGGCGAG
GCGATCGTCA GTCGCCGCCT TGCCAAGATC GCGCTCGATG AAGACTCGCC GATCCTCGCC
GGCTCGCTGT CGGACGCGAA CGGCTGGAAG GTCTTCGATC AGGTGACGAT CGGCGCGGTG
GCCAGGGAGG GCGCGTGGCG GGAGGCGCTG GCGATCGTCG AGCAGGAGCG GCGGCGCGCG
CTCGAGCATG GCTTTACCGA GGCCGAGGTC GCCGAACAGA TTGCCAACCA GCGCACCGCG
CTGCGCAATG CCGTGGCGGG TGCGGCGACG CGGCGCAGCG AGGCGCTTGC CGACGCGCTG
GTCGTCGCGG CCAGGGGCGA AGCGGTCTTC ACCCGTCCCG AAACCGCCCT CGCGCTGTTC
GAGTCGGTGG CCCCGTCGCT CGACGCCGCC GCGATCACCA CCGCGTTCCG CAAGCGGACG
GAGGGGCTGA GCGCGCCGCT CGTGCGCGTG ACGGCGAAGG CGCCGATCGA CGGCGGCGTC
GACGCGATCC TCGCCAGCCT GCGTGCATCG ACGCAGGTGG CGGTCGCGCC GCCCGCCGAA
GCCGCGAGCG CGGCCTTCGC CTACGACAAT TTCGGCACGC CGGGCACGAT CGTCGCCGAC
GACCGGATCG AGGATCTGGG CATCCGCCGC ATCCGCTTTG CCAATAATGT CATGCTCAAT
GTCAAGACGA CCGATTTTCA GAAGGATCGC GTGCTGTTGT CGCTGCGCGT CGACGGCGGA
ACATTGCTCG CGACGCGCGA CGATCCGACG CGCGTGTCGC TCGCCAGCTC GTTCATGCTC
GGCGGGCTGG AGGCGCATAG CGTCGATGAT CTGCGTACCA TCTTTGCGGG CAGGACGGTC
AGCCCCGCCT TCGGCGCCGC GATCGACGCC TTCGGCGGCA CGGCGACGAC CTCGCCCGAG
GATTTCGCGC TCCAGGCCAA GCTGCTCGCC GCCTATCTGA CGCACCCCGG CTACCGCGCC
GACGGGCTCG CGCTCATCCG CCGCGTGCTG CCGCAACAAT ATGCCGCGAA CGACGCCACC
CCGGCGGCGG TGATCGCGCG CGATGTCGGC GGCATCCTCG CGAACGACGA TCCGCGCGCG
CAGACCCCGC CGCTCGAAAA GGTGATGGCG CTCGACTGGG CGCAGCTCAA ACCCGTGATC
GCCGACAGCC TCGCGCACGG CGCGATCGAG ATCGGCGTCG TCGGCGACAT AAGCGAGCAG
GCGGCGATCG ATACCATTGC GGCGACCTTT GGCGCGCTGC CGCCGCGCCG CGCCGCCTTC
GACCCGCGTA GCGAGGCGCG TGTCCGCGAC TATGCCGCCG ACCGCAGCGA ACGCACGCTG
ATCCACAAGG GGCCAGCCGA GCAGGCCGAA TTGCGCGTCT ATTGGCCCGC GCGCGACGAC
AGCGATCTGG CCGAGGCGAT GCGGCTCAAC CTGCTGGCGC GCGTGATGCA GCTCAAACTG
ACCGAGGAAC TGCGCGAGCG GCTGGGCGAA AGCTACAGCC CCGGTGCCGC CGCCAGCCTG
TCGGACGAGT TTCCGGGCTA TGGCCACCTC TTTGCCGCGA GCAATGTCGA TTACAAGGAT
CTGGCGACGA CGCGCGCGGC GATCTTTGCC ATCGCAAAGG AACTGCGCGA TGCGCCCGCC
GACCCGGACC TGGTCGACCG CGCGCGGCGC CCGCTGGTCG AGGCGATGAC CAAGGCGCGG
CGCGAAAACG CCTATTGGCT GAACTATGTC GCCGAAGCGA CCAGCCAGGC CGACCGGCTC
GACCGCAGCC GCAACGGCAT CGCCGAGGTC GAGGCCGCGA CCCCTGAGGA GTTGCAGGCG
CTCGCGCAGC GCTATCTGAC CGACGACAAG GCGCTGGTGA TCAAGGCGGT GAGCGACAAG
GTGGGGAAAT AA
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| Protein sequence | MTSLILRRAA TALLPFALLA VCSPPLLAKE VERPAATAAV NPQGDAARAW NFAASDVPVD
PGTIFGVLPN GMKYALLKNS TPRDSVVIRM RLDVGSFAEA DDQRGLAHFL EHMAFNGSTN
VPEGEMIKLL ERKGLAFGAD TNASTGFDET IYKLDLPNAS DDLIDTGLML MRETASELTL
DSAAIDRERG IILSERRARD TYQLRNIVDQ LDFQMQGMIV ADRLPIGTEA VIRTAPASRL
RDLYERYYRP ERATLVMVGD FDPAAVEAKI KARFADWTGK GPAGVDPDIG AIDYARPAAA
DDFVDPAIQD SVTLAAFRPW VDEPDTRAKR ARLIAENIGE AIVSRRLAKI ALDEDSPILA
GSLSDANGWK VFDQVTIGAV AREGAWREAL AIVEQERRRA LEHGFTEAEV AEQIANQRTA
LRNAVAGAAT RRSEALADAL VVAARGEAVF TRPETALALF ESVAPSLDAA AITTAFRKRT
EGLSAPLVRV TAKAPIDGGV DAILASLRAS TQVAVAPPAE AASAAFAYDN FGTPGTIVAD
DRIEDLGIRR IRFANNVMLN VKTTDFQKDR VLLSLRVDGG TLLATRDDPT RVSLASSFML
GGLEAHSVDD LRTIFAGRTV SPAFGAAIDA FGGTATTSPE DFALQAKLLA AYLTHPGYRA
DGLALIRRVL PQQYAANDAT PAAVIARDVG GILANDDPRA QTPPLEKVMA LDWAQLKPVI
ADSLAHGAIE IGVVGDISEQ AAIDTIAATF GALPPRRAAF DPRSEARVRD YAADRSERTL
IHKGPAEQAE LRVYWPARDD SDLAEAMRLN LLARVMQLKL TEELRERLGE SYSPGAAASL
SDEFPGYGHL FAASNVDYKD LATTRAAIFA IAKELRDAPA DPDLVDRARR PLVEAMTKAR
RENAYWLNYV AEATSQADRL DRSRNGIAEV EAATPEELQA LAQRYLTDDK ALVIKAVSDK
VGK
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