Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0577 |
Symbol | |
ID | 4082008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 588818 |
End bp | 589216 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008935 |
Product | Iojap-related protein |
Protein accession | YP_615631 |
Protein GI | 103486070 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.258721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCTCCG CCACCCAGGG GGCCGCGCCG GGCGCCGCTC CTGCCAATGA CAGCGTGGAC GCGCTCCACG CGCTGATCCT CCACCAGCTG GACGAGGACC AGGCCCAGGA AACCATCTCG ATCCCGCTTG CCGGCAAGAG CAGCATCGCC GACCATATGG TGATCGCGAG CGGCCGTTCG ACGCGCCACG TCTCGGCGAT TGCCGAAAAA CTGGCGCAGC GGATCAAGCA GGAAGCGGGC CGTCCGGTTC GCGTCGAAGG GCTGCCCAAC GCCGATTGGG TGCTGCTCGA TGCGGGCGAC GTCATCGTCC ACCTGTTCCG TCCCGAGGTT CGCAGCTTCT ATAACCTCGA ACGCATGTGG TCGTTCGGCG ACGCGCCGCC GGTCGCAGCC GCGAATTGA
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Protein sequence | MISATQGAAP GAAPANDSVD ALHALILHQL DEDQAQETIS IPLAGKSSIA DHMVIASGRS TRHVSAIAEK LAQRIKQEAG RPVRVEGLPN ADWVLLDAGD VIVHLFRPEV RSFYNLERMW SFGDAPPVAA AN
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