| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0574 |
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| Symbol | |
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| ID | 4082005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 585400 |
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| End bp | 586788 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008932 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_615628 |
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| Protein GI | 103486067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.529282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CGACCAAAAC CACCGCGTCC CCGAAACGCC GCTTCGCGCT GTGGCAGGGC
GCCGCCGCGC TTTCGACGCT GGCGCTGGTT CCGCTCGCGA CCGGCGCAAT GGCCACCGTC
GATTCGAAGA CGCAGGAAGA AATCGCGCGC TTCATGGACG TCTATCTGGA AGTGAAGTCC
AACTATGTCG AACCGGTCGA GGATGCCAAG CTGATCGAGG GCGCGATCAA CGGGATGCTC
GCCAGCCTCG ACCCGCATTC GGGCTATCTC GACGCACGCG GATTTTCGAA CCTGCGCACC
CAGACCGATG GCGAATATGG CGGGCTGGGC CTGTCGGTGA CGATGGAAGA CGGCGTGGTC
AAGGTGATCG CGCCGACCGC CGACACGCCC GCCGCGCGCG CCGGGATCAA GGCGGGCGAT
TTCATCACTC ACATCAACGA CGAGCTGATC TTCGGGCTGA CGCTCGACGA GGCGGTCGAA
CAGATGCGCG GACGGCCGGG GACGCCGATC GACATCACGA TCGTGCGCGA AGGCCAGGAC
AAGCCGATCG AGATGACGCT GACGCGCGAG ATCATCGACC TCAAACCCGT GAAATGGGAG
GTCAGGGGCG ATGTCGGCGT GCTCACCGTC ACCAGCTTCT CGGCCGACGC GACCACCGAC
CTCAAGGCCG CGATGATGGC GGTCGAAAAA TCGCTCGGCA AAAAACCGCG CGGCTGGGTG
CTCGACCTCC GCTCGAACCC CGGCGGGCTG CTCGACGAAG CTGTCGGGAT CAGCGACCTG
TTCCTCGAAC GCGGCGAGAT CGTGTCGCAG CGCGGACGCC GCAAGGGCGA CATCGAACGC
TATTTCGCCG AACCGGGCGA TCTGGCCGCC GGCGCGCCGG TGATCGTGCT GATCGACGCC
GGCTCGGCCT CGGCATCCGA AATCGTTGCC GGCGCGCTGC AGGACCAGCA TCGCGCGGTC
GTCATGGGCG AACGCAGCTT CGGCAAGGGG TCGGTGCAGA CGGTGCTCCC GCTCAGCGAC
ACCACCGCGC TGCGGCTGAC CACCGCGCGC TATTACACGC CGTCGGGGCG CAGCGTGCAG
GAAGGCGGGA TCGAACCCGA CATCAAGGTG CCGCAGCTCA GCGACCCCGA TTATGCGTCG
CGCCCCAAGT TCCGCGAAAG CGACCTGCGC CGTCACCTGA TCAACGAGAA AAAGGTCGAC
AACGGCCTCA TTGAAAAGGA TGAAACGCCC GACCCGCGCT TCACCGCGAC CGCTGACGAG
CTGAAGGCCA AGGGGATCGA GGATTTCCAG TTGCACTATG CGTTGCAGAC GATAGGCCGG
ATCGGCCCTG GAACGCCGCG CATGGCCGCG GCGGCCAAGC CGGCCGCGAA GCCGGCGCGC
CGCAACTGA
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| Protein sequence | MTDTTKTTAS PKRRFALWQG AAALSTLALV PLATGAMATV DSKTQEEIAR FMDVYLEVKS
NYVEPVEDAK LIEGAINGML ASLDPHSGYL DARGFSNLRT QTDGEYGGLG LSVTMEDGVV
KVIAPTADTP AARAGIKAGD FITHINDELI FGLTLDEAVE QMRGRPGTPI DITIVREGQD
KPIEMTLTRE IIDLKPVKWE VRGDVGVLTV TSFSADATTD LKAAMMAVEK SLGKKPRGWV
LDLRSNPGGL LDEAVGISDL FLERGEIVSQ RGRRKGDIER YFAEPGDLAA GAPVIVLIDA
GSASASEIVA GALQDQHRAV VMGERSFGKG SVQTVLPLSD TTALRLTTAR YYTPSGRSVQ
EGGIEPDIKV PQLSDPDYAS RPKFRESDLR RHLINEKKVD NGLIEKDETP DPRFTATADE
LKAKGIEDFQ LHYALQTIGR IGPGTPRMAA AAKPAAKPAR RN
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