Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0574 |
Symbol | |
ID | 4082005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 585400 |
End bp | 586788 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008932 |
Product | carboxyl-terminal protease |
Protein accession | YP_615628 |
Protein GI | 103486067 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.529282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CGACCAAAAC CACCGCGTCC CCGAAACGCC GCTTCGCGCT GTGGCAGGGC GCCGCCGCGC TTTCGACGCT GGCGCTGGTT CCGCTCGCGA CCGGCGCAAT GGCCACCGTC GATTCGAAGA CGCAGGAAGA AATCGCGCGC TTCATGGACG TCTATCTGGA AGTGAAGTCC AACTATGTCG AACCGGTCGA GGATGCCAAG CTGATCGAGG GCGCGATCAA CGGGATGCTC GCCAGCCTCG ACCCGCATTC GGGCTATCTC GACGCACGCG GATTTTCGAA CCTGCGCACC CAGACCGATG GCGAATATGG CGGGCTGGGC CTGTCGGTGA CGATGGAAGA CGGCGTGGTC AAGGTGATCG CGCCGACCGC CGACACGCCC GCCGCGCGCG CCGGGATCAA GGCGGGCGAT TTCATCACTC ACATCAACGA CGAGCTGATC TTCGGGCTGA CGCTCGACGA GGCGGTCGAA CAGATGCGCG GACGGCCGGG GACGCCGATC GACATCACGA TCGTGCGCGA AGGCCAGGAC AAGCCGATCG AGATGACGCT GACGCGCGAG ATCATCGACC TCAAACCCGT GAAATGGGAG GTCAGGGGCG ATGTCGGCGT GCTCACCGTC ACCAGCTTCT CGGCCGACGC GACCACCGAC CTCAAGGCCG CGATGATGGC GGTCGAAAAA TCGCTCGGCA AAAAACCGCG CGGCTGGGTG CTCGACCTCC GCTCGAACCC CGGCGGGCTG CTCGACGAAG CTGTCGGGAT CAGCGACCTG TTCCTCGAAC GCGGCGAGAT CGTGTCGCAG CGCGGACGCC GCAAGGGCGA CATCGAACGC TATTTCGCCG AACCGGGCGA TCTGGCCGCC GGCGCGCCGG TGATCGTGCT GATCGACGCC GGCTCGGCCT CGGCATCCGA AATCGTTGCC GGCGCGCTGC AGGACCAGCA TCGCGCGGTC GTCATGGGCG AACGCAGCTT CGGCAAGGGG TCGGTGCAGA CGGTGCTCCC GCTCAGCGAC ACCACCGCGC TGCGGCTGAC CACCGCGCGC TATTACACGC CGTCGGGGCG CAGCGTGCAG GAAGGCGGGA TCGAACCCGA CATCAAGGTG CCGCAGCTCA GCGACCCCGA TTATGCGTCG CGCCCCAAGT TCCGCGAAAG CGACCTGCGC CGTCACCTGA TCAACGAGAA AAAGGTCGAC AACGGCCTCA TTGAAAAGGA TGAAACGCCC GACCCGCGCT TCACCGCGAC CGCTGACGAG CTGAAGGCCA AGGGGATCGA GGATTTCCAG TTGCACTATG CGTTGCAGAC GATAGGCCGG ATCGGCCCTG GAACGCCGCG CATGGCCGCG GCGGCCAAGC CGGCCGCGAA GCCGGCGCGC CGCAACTGA
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Protein sequence | MTDTTKTTAS PKRRFALWQG AAALSTLALV PLATGAMATV DSKTQEEIAR FMDVYLEVKS NYVEPVEDAK LIEGAINGML ASLDPHSGYL DARGFSNLRT QTDGEYGGLG LSVTMEDGVV KVIAPTADTP AARAGIKAGD FITHINDELI FGLTLDEAVE QMRGRPGTPI DITIVREGQD KPIEMTLTRE IIDLKPVKWE VRGDVGVLTV TSFSADATTD LKAAMMAVEK SLGKKPRGWV LDLRSNPGGL LDEAVGISDL FLERGEIVSQ RGRRKGDIER YFAEPGDLAA GAPVIVLIDA GSASASEIVA GALQDQHRAV VMGERSFGKG SVQTVLPLSD TTALRLTTAR YYTPSGRSVQ EGGIEPDIKV PQLSDPDYAS RPKFRESDLR RHLINEKKVD NGLIEKDETP DPRFTATADE LKAKGIEDFQ LHYALQTIGR IGPGTPRMAA AAKPAAKPAR RN
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