Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0566 |
Symbol | |
ID | 4081997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 579742 |
End bp | 580131 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008924 |
Product | 30S ribosomal protein S11 |
Protein accession | YP_615620 |
Protein GI | 103486059 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0100] Ribosomal protein S11 |
TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.628191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCGTG AACCGCAGCG CCTTCGTCGG CGCGAACGCA AGAATATCTC GTCGGGTGTG GCCCACGTCA ACGCGACCTT CAACAATACG ATGATCACCA TCACCGACGC ACAGGGCAAT GCGATTGCCT GGTCGAGCGC CGGCATGATG GGCTTCAAGG GCAGCCGCAA ATCGACTCCC TATGCGGCGC AGGTCTGCGC CGAAGACGCG GGCAAGAAGG CCGCCGAACA TGGCGTCCGC ACGCTGGAAG TCGAAGTCAA GGGCCCCGGC GCCGGCCGTG AATCGGCGCT GCGTGCGCTG CAGGCCGTCG GTTTTCACAT CACGTCGATC CGCGACGTGA CACCGATCCC GCACAATGGC GTCCGCCCGG CCAAACGTCG CCGCGTCTGA
|
Protein sequence | MAREPQRLRR RERKNISSGV AHVNATFNNT MITITDAQGN AIAWSSAGMM GFKGSRKSTP YAAQVCAEDA GKKAAEHGVR TLEVEVKGPG AGRESALRAL QAVGFHITSI RDVTPIPHNG VRPAKRRRV
|
| |