Gene Sala_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0566 
Symbol 
ID4081997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp579742 
End bp580131 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content65% 
IMG OID638008924 
Product30S ribosomal protein S11 
Protein accessionYP_615620 
Protein GI103486059 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.628191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTG AACCGCAGCG CCTTCGTCGG CGCGAACGCA AGAATATCTC GTCGGGTGTG 
GCCCACGTCA ACGCGACCTT CAACAATACG ATGATCACCA TCACCGACGC ACAGGGCAAT
GCGATTGCCT GGTCGAGCGC CGGCATGATG GGCTTCAAGG GCAGCCGCAA ATCGACTCCC
TATGCGGCGC AGGTCTGCGC CGAAGACGCG GGCAAGAAGG CCGCCGAACA TGGCGTCCGC
ACGCTGGAAG TCGAAGTCAA GGGCCCCGGC GCCGGCCGTG AATCGGCGCT GCGTGCGCTG
CAGGCCGTCG GTTTTCACAT CACGTCGATC CGCGACGTGA CACCGATCCC GCACAATGGC
GTCCGCCCGG CCAAACGTCG CCGCGTCTGA
 
Protein sequence
MAREPQRLRR RERKNISSGV AHVNATFNNT MITITDAQGN AIAWSSAGMM GFKGSRKSTP 
YAAQVCAEDA GKKAAEHGVR TLEVEVKGPG AGRESALRAL QAVGFHITSI RDVTPIPHNG
VRPAKRRRV