| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0562 |
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| Symbol | |
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| ID | 4081452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 575672 |
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| End bp | 576607 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638008920 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_615616 |
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| Protein GI | 103486055 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.293612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC CCGATTATGA AGGCTGGGCC TGTTTCGTTG CGGTCGCCGA CGGCGGCAGC
TTCACCGCGG CGGCTGCCGC GCTCGGTCTG TCGAAGGCGA CCGTGTCGAA GGCGGTGACG
CGGCTCGAGA CGTCGCTTGG CATCACCTTG TTGCACCGAA GTTCGCGCGT TGTCGCGGTG
TCGACGGCGG GGGCGGGGCT GCTCGACGAA GCGCGCGCGA TGGTCGCCGC GGCGACCGCG
GCCACCGAGG CGGCGCGCGG CGACCGGCTC GACCTCGCCG GCCCGATCCG CCTTGCCGCG
CCGATGAGCT TCGGGATCAA GGTGCTTGGC CCGGTGCTCG CCGCCTTTCT CGACCGCCAT
CCCGCAGTCG AGATCGACCT GTTGCTCAGC GACGCGCGCA ACGACCCGAT CGCCGAGGGC
ATCGACCTCA CGCTGCGCAT CGCGCCGCTC GCCGATTCCA GCCTGCTGGC GCGCACGATC
GCGCCCGTCG CGGCGTCGCT GATCGCCAGC CCCGCCTATC TCGAAAAGCA CGGCACACCC
CGGCATCCGC TCGACCTCGC GCGCCATCGC CTCATCGGCT ACGGTCATCG CCAGCGCGCG
ATGCCGCTCC ATTTCTCGCG CGAAGGCGAA GAAGCGACGG TGCTGCCGAC CGGGCCGCTG
TTCGCGAACA ATGGCGATGT GATGGTGCCG ATGATCGTCG CGGGGAGCGG CATTGCGGTG
CTGCCCGATT TCATCGCGGC GGAGGAACTC GCCGCGGGCA CCGTGGTTCC GATCCTCACC
GACTGGTCGC TGCCGCAGTC GTATCTGCAC CTTCTCTCGC CGCCCTCGCG GCTGCGTCCG
GCGCGGGTGC GCGCCTTTTC GGATCATCTC GTCGATACGC TGAAAGGCTC GTGCCGTGGC
GCCAACGAGC GCTATGCGGC GCTCCGAAAG GGGTGA
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| Protein sequence | MALPDYEGWA CFVAVADGGS FTAAAAALGL SKATVSKAVT RLETSLGITL LHRSSRVVAV
STAGAGLLDE ARAMVAAATA ATEAARGDRL DLAGPIRLAA PMSFGIKVLG PVLAAFLDRH
PAVEIDLLLS DARNDPIAEG IDLTLRIAPL ADSSLLARTI APVAASLIAS PAYLEKHGTP
RHPLDLARHR LIGYGHRQRA MPLHFSREGE EATVLPTGPL FANNGDVMVP MIVAGSGIAV
LPDFIAAEEL AAGTVVPILT DWSLPQSYLH LLSPPSRLRP ARVRAFSDHL VDTLKGSCRG
ANERYAALRK G
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