| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0550 |
|---|
| Symbol | |
|---|
| ID | 4081440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 565595 |
|---|
| End bp | 566359 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638008908 |
|---|
| Product | molybdenum ABC transporter, periplasmic molybdate-binding protein |
|---|
| Protein accession | YP_615604 |
|---|
| Protein GI | 103486043 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0725] ABC-type molybdate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.43918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.201117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTG TCCTTCGCCT GCTTCTCGCG CTCGCCGGGC TGTTGCTGAC GCCTGCCGGT
GCGGCGGCGG CGCGGGGGCC GGTCGTGCTC GCGGCGGCGA GCCTGCAGGA ATCGCTCACC
GAAGCGGCGA ACGTCTGGGC GGCGCGGGGG CATCCGAAAC CCCTGCTGTC CTTCGCCGCC
TCGTCGGCGC TCGCGCGGCA GGTCATTGCC GGGGCGCCCG CCGACATCTT CCTCTCGGCC
GACGAACCGT GGATGGATGC GGTCGCGAAG GCGGGCAGGC TCCGCGCGGG GACGCGAGTC
AGGTTGGTCG GCAATCGCCT CGTGCTGATC GCACCCGCCG CGAGCAAGGT CCGGCTGACC
CCGGCGCACG GCTTTCCACT CGCCCGAGCG CTCGGTTCCG GCCGTCTCGC CATCGCCGAC
CCCGATGCGG TGCCTGCGGG CCGCTATGCG AGGGCAGCGC TGGCGCATCT CGGCGTGTGG
GGCAGCGTCG CGGGCAGGCT CGCGCCCGCC GAAAATGTCC GCGCCACGCT GGCACTCGTC
GAGCGCGGTG CCGCGCCGCT CGGCATCGTC TATGCGACCG ACGCGCACGC GTCGAAAGCG
GTGCGGATCG TCGGCAGCTT TCCCGCCGCG AGCCACCCGC CGATCCGCTA TCCGCTGGCG
GTGCTGAAAA CATCGCGGCA CCGCGACGCC GCGGCCTTTC GTGCCTTCCT CTTGTCCAGC
CAAGGCCGCG CGATATTTGC GCGCCACGGT TTTTCGGCGC CGTGA
|
|---|
| Protein sequence | MAFVLRLLLA LAGLLLTPAG AAAARGPVVL AAASLQESLT EAANVWAARG HPKPLLSFAA
SSALARQVIA GAPADIFLSA DEPWMDAVAK AGRLRAGTRV RLVGNRLVLI APAASKVRLT
PAHGFPLARA LGSGRLAIAD PDAVPAGRYA RAALAHLGVW GSVAGRLAPA ENVRATLALV
ERGAAPLGIV YATDAHASKA VRIVGSFPAA SHPPIRYPLA VLKTSRHRDA AAFRAFLLSS
QGRAIFARHG FSAP
|
|---|
| |