Gene Sala_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0535 
Symbol 
ID4081425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp550335 
End bp550820 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID638008893 
Producthypothetical protein 
Protein accessionYP_615589 
Protein GI103486028 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.145284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.658808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA TCCGCGCGCA CGCTCCCGCC CATCCCCACG CCGCCGCCGC GCGCGCGGCG 
CGCCGCGCCG ATGCAAAGGT CATCGGCATC GACGAAGCCT TTATCGCGGC ATTCGTCGAC
GATTTTTACG CCGCGATCCG CGCCGATGCG CTGCTCGGCC CGGTCTTTGC CGCTCGCATC
GACGATTGGC CCGCGCATCT CGCCCAGATG AACCGCTTCT GGCAGTCGAT CCTGCTGGCC
GCGGGCAGTT TTTCGGGCAA TCCGATGGTC AAGCATCTCG CGATCCCCGG CCTCGACGAC
GCGCATTTCG CGCACTGGCT CGACCTTTTC TACGCCACGC TGCACCGCCT CGCGCCGACG
CCCGAAGCGG CGAAACTGGT CGGGGAGAAG GCGCGAATGA TCGCCGAAAG CCTGCTCACC
GGCATCCGCC TGCATCGCGA CCGCGACGCC GATCTGTTCA GCAAAGTGGA GCTTCCCCAT
GTCTGA
 
Protein sequence
MQPIRAHAPA HPHAAAARAA RRADAKVIGI DEAFIAAFVD DFYAAIRADA LLGPVFAARI 
DDWPAHLAQM NRFWQSILLA AGSFSGNPMV KHLAIPGLDD AHFAHWLDLF YATLHRLAPT
PEAAKLVGEK ARMIAESLLT GIRLHRDRDA DLFSKVELPH V