Gene Sala_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0513 
Symbol 
ID4081403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp531064 
End bp531351 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content66% 
IMG OID638008871 
Productchorismate mutase 
Protein accessionYP_615567 
Protein GI103486006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01795] monofunctional chorismate mutase, alpha proteobacterial type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.575321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACC AGCTGAGCCG TTACCGCCAG AGCATCGACA ATATCGACGC GGCGCTCGTC 
TATATGCTCG CCGAACGCTT CAAGGTGACC AAGGCTGTCG GCGAACTGAA GGCGCGCGAA
GGCCTGCCTC CCGCCGACCC CGGCCGTGAG GAGCGGCAGA TCGAGCGGCT GCGCGCGCTC
GCCCGCGACG CCGACCTCGA CCCCGAGTTC AGCGAGAAGT TCCTGCGCTT TATCATCGAC
GAGGTGATCC GCCACCACCA GCAGGCGAAG CGCGAGCAGG GCGCATGA
 
Protein sequence
MDDQLSRYRQ SIDNIDAALV YMLAERFKVT KAVGELKARE GLPPADPGRE ERQIERLRAL 
ARDADLDPEF SEKFLRFIID EVIRHHQQAK REQGA