Gene Sala_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0500 
Symbol 
ID4081390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp518704 
End bp519309 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID638008858 
ProductDSBA oxidoreductase 
Protein accessionYP_615554 
Protein GI103485993 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.835222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCA AAAGCCTCGA ACTCATCTTT GATTTCGGCA GCCCCAACGC CTATCTGGCG 
ATGAAGGCGC TCCCCGACCT GCTCGACCGC ACCGGCGCCG ATCTTGTCAT TACGCCGTGC
CTGCTCGGCG GCATCTTCAA GGCGACGGGG AACAAGGCGC CGATGGTGCA ATATGCCGAT
GCGCCCGCCA AGCTCGCTTA CGAGAATCTG GAGATGCGGC GATTCATCGC CCGGCATGGC
CTCACCAGAT TTCGCCTCAA CCCGCATTTC CCGGTCAACA CCTTGCTGAT CATGCGCGGC
GCGATCGTCG CCGAGGACGA GGGCCTTCTC GACGACTATG TCGACGCGGT GAACCGCGCG
ATGTGGGAGG AAGGGCTGAA GATGGACGAT GCGGAGGTCG TTACGTCCTT CCTGTCGGCG
AACGGTTTCG ACGGTCCGGC ATTGCTTGCG CGCACGCAGG AGCCGGACAT CAAGGCCAGG
CTCGTCCAAA ACACCGAAGC CGCGGTCGCG CGCGGGGTGT TCGGCATTCC GACCTTCTTC
GTCGGCGACG AGATGTTTTT CGGTAAGGAT CGGCTGGGCC AGGTCGAGGA GGCGCTGCTC
GGTTGA
 
Protein sequence
MVTKSLELIF DFGSPNAYLA MKALPDLLDR TGADLVITPC LLGGIFKATG NKAPMVQYAD 
APAKLAYENL EMRRFIARHG LTRFRLNPHF PVNTLLIMRG AIVAEDEGLL DDYVDAVNRA
MWEEGLKMDD AEVVTSFLSA NGFDGPALLA RTQEPDIKAR LVQNTEAAVA RGVFGIPTFF
VGDEMFFGKD RLGQVEEALL G