Gene Sala_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0485 
Symbol 
ID4080533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp501941 
End bp502702 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID638008843 
Producthypothetical protein 
Protein accessionYP_615539 
Protein GI103485978 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.379995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGC CTTTTGTCAC CGCGCCGACG CTGGACGGCA TCGCGCACGG ATTTTTCGGG 
CGCCGCGGCG GCGTGTCGAC GGGTGATCTT GCCTCGCTCA ATTGCGGCCT CGGTTCGGGC
GACGATCCCG CGCTGATCGC CGAGAACCGG CGGCGCGTTG CCGATGCCGT TCTGCCGGGC
GCGGCGCTGA CCGGCCTTTA TCAGGTGCAT GGCAATCGCT GCATCATCGT CGACGAACGC
ACCGACCTTG CGGCGCGGCC CGAAGCCGAC GCGATGGCGA CCCGCACGCC CGGCCTCTTG
CTTGGCATAT TGACCGCCGA TTGCGTCCCC GTCCTTTTCG CCGACCGCGA GGCGGGCGTT
ATCGGCGCAG CCCATGCAGG CTGGAAGGGC GCGCTCGCCG GTGTCACCGA CGCGACGCTG
GCCGCAATGG AAAGCCTCGG TGCGCGCCGG GCCACCATCG CCGCGGCGGT CGGCCCGTGC
ATCGGCCGCG CCTCCTATGA GGTCGACGAT GGTTTTGTGG AGCGCTTCGT CGCCGACGAT
CCGGCGAACG AGCGCTTCTT CGCCGCGGCC AAGCCCGGCC ACGCAATGTT CGACATCGCC
GCCTATGTCG CCGCGCGCCT CGCCGCCGCC GGGGTCGCGC GAATTGCCAT CGGCGGGCAG
GACACCTATG CCCTGCCCCA GGATTATTTC AGCTATCGGC GGGCGTGCCA CAAAGGCGAA
AACAGCTATG GCCGCCAATT GTCGGTGATC GGGTTGAGGT AG
 
Protein sequence
MNAPFVTAPT LDGIAHGFFG RRGGVSTGDL ASLNCGLGSG DDPALIAENR RRVADAVLPG 
AALTGLYQVH GNRCIIVDER TDLAARPEAD AMATRTPGLL LGILTADCVP VLFADREAGV
IGAAHAGWKG ALAGVTDATL AAMESLGARR ATIAAAVGPC IGRASYEVDD GFVERFVADD
PANERFFAAA KPGHAMFDIA AYVAARLAAA GVARIAIGGQ DTYALPQDYF SYRRACHKGE
NSYGRQLSVI GLR