Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0485 |
Symbol | |
ID | 4080533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 501941 |
End bp | 502702 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638008843 |
Product | hypothetical protein |
Protein accession | YP_615539 |
Protein GI | 103485978 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.379995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCGC CTTTTGTCAC CGCGCCGACG CTGGACGGCA TCGCGCACGG ATTTTTCGGG CGCCGCGGCG GCGTGTCGAC GGGTGATCTT GCCTCGCTCA ATTGCGGCCT CGGTTCGGGC GACGATCCCG CGCTGATCGC CGAGAACCGG CGGCGCGTTG CCGATGCCGT TCTGCCGGGC GCGGCGCTGA CCGGCCTTTA TCAGGTGCAT GGCAATCGCT GCATCATCGT CGACGAACGC ACCGACCTTG CGGCGCGGCC CGAAGCCGAC GCGATGGCGA CCCGCACGCC CGGCCTCTTG CTTGGCATAT TGACCGCCGA TTGCGTCCCC GTCCTTTTCG CCGACCGCGA GGCGGGCGTT ATCGGCGCAG CCCATGCAGG CTGGAAGGGC GCGCTCGCCG GTGTCACCGA CGCGACGCTG GCCGCAATGG AAAGCCTCGG TGCGCGCCGG GCCACCATCG CCGCGGCGGT CGGCCCGTGC ATCGGCCGCG CCTCCTATGA GGTCGACGAT GGTTTTGTGG AGCGCTTCGT CGCCGACGAT CCGGCGAACG AGCGCTTCTT CGCCGCGGCC AAGCCCGGCC ACGCAATGTT CGACATCGCC GCCTATGTCG CCGCGCGCCT CGCCGCCGCC GGGGTCGCGC GAATTGCCAT CGGCGGGCAG GACACCTATG CCCTGCCCCA GGATTATTTC AGCTATCGGC GGGCGTGCCA CAAAGGCGAA AACAGCTATG GCCGCCAATT GTCGGTGATC GGGTTGAGGT AG
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Protein sequence | MNAPFVTAPT LDGIAHGFFG RRGGVSTGDL ASLNCGLGSG DDPALIAENR RRVADAVLPG AALTGLYQVH GNRCIIVDER TDLAARPEAD AMATRTPGLL LGILTADCVP VLFADREAGV IGAAHAGWKG ALAGVTDATL AAMESLGARR ATIAAAVGPC IGRASYEVDD GFVERFVADD PANERFFAAA KPGHAMFDIA AYVAARLAAA GVARIAIGGQ DTYALPQDYF SYRRACHKGE NSYGRQLSVI GLR
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