| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0481 |
|---|
| Symbol | |
|---|
| ID | 4080529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 496866 |
|---|
| End bp | 497972 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638008839 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615535 |
|---|
| Protein GI | 103485974 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.248573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCCA GGGCGGATTT CGAACATAGC GAGGGCGCCG ATGGCGTCGA GGTTCGCTTC
ACCGGGCGGC TGACGCTCGC GCGGCTTGGC GACCTGCCCG CACGGCTCGA CGCGCTCGGG
CCGATCGCAA CGCTGGACCT GTCGGCGATC GACCGCATCG ATACCGTCGG CGCGTGGATC
GTCACGCGCA CCGCCGCCGA CCACGACGCC AGGATCACCG GCGCGAGCGC CGATGCGCAG
CGGCTGCTCG ACGCGCTCGC GAGCGACAAG AGCGAATATC GCGTCCACCG CGACCGCCGC
CCGGCATGGG TACGAATGCT CGAACAGATC GGCACGGCCA GCGTCGCGGT CTGGAACGAA
CTGCTCGGCA TCGTCGGCTT TTTCGGTGCG ATGATCGTCG CGATCTTCAA CCAGATCCGC
GCCCGCCGAC GCCTGCGCTG GAACGCGATC GTCACGCGCT TTCAGACCGT CGGCGTCGAC
GCCCTGCCCA TCATCGGCCT GATGAGTTTT CTGATCGGTA TCGTCATCGC GCAGCAGGGC
GCGGTGCAGC TCGAACAATT CGGGCTGGAG GTGTTCACGA TCAACCTCGT CGGGCGCGCC
TCGATCCGCG AGCTGGGCCT CCTGATGACC GCGATCATGG TCGCGGGCCG GTCGGGCAGC
GCCTTTGCCG CACAGATCGG GACGATGAAA CTGACCGAAG AGGTCGACGC GATGCGCACG
ATCGGCGTGT CGCCGATGGA GGCGATCGTG CTGCCGCGCG TCGCCGCCTC GACGATCACC
ATGCCGCTGC TCGGCTTTTA CGCCAGCCTT TGCGCGATCG CGGGGGGTGG CCTTTTCTGC
TGGGTCGGGC TCGATATCCC GCCGCTCACC TATATCCAGC GGCTGCGCGA AATCATCCCG
ATGACCGATT TCTGGATCAT GCTGATCAAG GCGCCGGTGT TCGGCATATT GATCGGCGTC
ACCGGCTGTT ACGAAGGGAT GCAGGTGCGC CAGAATGCGG AGGAAGTGGG CCAGCGGACG
ACCTCGGCGG TGGTCGCCGC CATCTTCCTC GTCATCGTCC TCGACGCCTT TTTCGCGGTC
TTCTTCTCGT CGCTCGGGTG GAATTGA
|
|---|
| Protein sequence | MVARADFEHS EGADGVEVRF TGRLTLARLG DLPARLDALG PIATLDLSAI DRIDTVGAWI
VTRTAADHDA RITGASADAQ RLLDALASDK SEYRVHRDRR PAWVRMLEQI GTASVAVWNE
LLGIVGFFGA MIVAIFNQIR ARRRLRWNAI VTRFQTVGVD ALPIIGLMSF LIGIVIAQQG
AVQLEQFGLE VFTINLVGRA SIRELGLLMT AIMVAGRSGS AFAAQIGTMK LTEEVDAMRT
IGVSPMEAIV LPRVAASTIT MPLLGFYASL CAIAGGGLFC WVGLDIPPLT YIQRLREIIP
MTDFWIMLIK APVFGILIGV TGCYEGMQVR QNAEEVGQRT TSAVVAAIFL VIVLDAFFAV
FFSSLGWN
|
|---|
| |