Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0473 |
Symbol | |
ID | 4080521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 488139 |
End bp | 489404 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008831 |
Product | hypothetical protein |
Protein accession | YP_615527 |
Protein GI | 103485966 |
COG category | [S] Function unknown |
COG ID | [COG2733] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.83946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACC TCGCTTCCCG CCGGCCGATT GGCGTCGCCA TCCCGGCAAA GCCCTCCAGC ATCCGTATCG TCGCCACCGG GATGCTCGTC GTCATGGCGA TCGTCTTCGT CGGCGCCAAG ACCTATCAGG ACGCGCATCC GGCGATCGGC TTTGTCCGCG CCTTTGCCGA GGCAGGGCTG GTCGGCGGGC TGGCCGACTG GTTCGCGGTG ACGGCCTTGT TCCGGCACCC GATGGGGCTG CCGATTCCGC ACACCGCGAT CATCCCGCGC AACAAGAACC GCATCGGCGA CACGCTCGCG CGCTTCCTGC TCACCAATTT CCTGCTGCCG CGGCTGATCG CGCGCAAGAT GCAGGCGGTC GATGTCGCGG GTGCGGTTGG AAAGTTCCTG TCCGAACCCG CCGAGGGCGG CGGGCGGCTG CGCCTCGGCG CGTCGCGGAT CATCGCTGAC GGGCTGGGCG CGCTCGACCA GCAAAGGCTG GGCGGCATGG TCAAATCGGC AATCGCCGAC CGTCTGCGCG AACTCGACGT CGCACCGCTA TTGGGACAGG CGTTGCAGGC GGCGCTTGCC GAGGGGCGCC ACCAGCCGCT CCTCGACGCG ATGGTCAAAT GGGGGTCGAA GACGCTCGAA CTCAACGAAC ATCTGATCCA CCAGATGGTC CACGACAACA GCAATGCGAT CGTGCGTTTC ACCGGGCTGG ACGAGAGCAT CTCGAACCGC ATCGTCGCGG GGCTGTCGAA GCTGCTCAGC GAAATGGCGG TCGACGAGAC ACATCCGCTG CGCCTCCGCG TCGAGGAGGG GCTCGCCAAG ATGGCGCTCG ACCTGCAGCA CGACCCCGAG GTGAAGGCCA GGGTCGCGCG CGTGCGCGAC GAGCTGCTCG AAAACAAGGC GGTGAAGCGC TGGCTCGACG GATTGTGGGA ACAGGGCCGC GCCGCGCTGC TCAAGGCCGC GCGCAACCCC GACACGATGC TCGCGGGGCG GATCGGCGAG CTGGTGACGC AATTCGGCGC GATGCTGGGG GAGGATGTGC ATATCAAGCG CACGCTCAAC CGCTATGCGC GGCGCGCGGT GGTCGGCATG GTCGACAGCT ATGGCGAGGC GGCGCTGAAG CTCGTATCGG ACACGATCCG CGGCTGGGAT GCCAAGACGA TCACCGACCG GCTGGAAAAT GCGGTCGGCG ACGATCTGCA ATATATCCGC ATCAACGGCA CGCTCGTTGG GGGGCTGGTG GGGGTGGCGA TCCACACGGT CGATGTGCTG ATCTAA
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Protein sequence | MTNLASRRPI GVAIPAKPSS IRIVATGMLV VMAIVFVGAK TYQDAHPAIG FVRAFAEAGL VGGLADWFAV TALFRHPMGL PIPHTAIIPR NKNRIGDTLA RFLLTNFLLP RLIARKMQAV DVAGAVGKFL SEPAEGGGRL RLGASRIIAD GLGALDQQRL GGMVKSAIAD RLRELDVAPL LGQALQAALA EGRHQPLLDA MVKWGSKTLE LNEHLIHQMV HDNSNAIVRF TGLDESISNR IVAGLSKLLS EMAVDETHPL RLRVEEGLAK MALDLQHDPE VKARVARVRD ELLENKAVKR WLDGLWEQGR AALLKAARNP DTMLAGRIGE LVTQFGAMLG EDVHIKRTLN RYARRAVVGM VDSYGEAALK LVSDTIRGWD AKTITDRLEN AVGDDLQYIR INGTLVGGLV GVAIHTVDVL I
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