| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0471 |
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| Symbol | |
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| ID | 4080519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 483394 |
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| End bp | 484608 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638008829 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_615525 |
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| Protein GI | 103485964 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGGA GGGATTTCGG CGTGAACTAC GAGCGGAAAG TGGATTCGAT GGACAGCCTG
GCGGGGACGC AAAGCTTTTA TGAAGAGGCC GACGACAGTC GCCGCAAGCG CACCCGGCTG
ATCGTCGCGG TCGTTTTGAT CGTGCTGGCG CTCGCTGCGG CCTATTATGC CTTTTCCAGC
GGTCGGGGCG CGGCCGATGC CGGGGGTGGC GAAGAGGCCA CGGTTCCGAA CATCACCGTC
GTCATTCCCG GCCGCGTGTC GGTCGAGGCG GTGATTACCA CCAACGGCAC AATCGCGGCG
CGGCGCGAGA TGCCGGTCGG CGTCGCGGGC GAGGGCGGGC AGGTCGAGCG CGTGCTCGTC
GAGCCCGGCC AGTGGGTCGA CGCGGGGCAG ACGCTCGCGG TGATCGACCG GTCGGTGCAG
TCGCAGCAGG CGGCGAGCCT CGCGGCGCAG ATCCGCGTCG CGCAGGCCGA CGCCAATCTG
GCGCAGGCCG AACTCGAACG CGCCGAAGCC CTTGTTTCGC GCGGTTTCAT TTCAAAGGCC
GACATGGACC GCAAGCGCGC GACGCGCGAT GCGGCCAATG CACGCGTCCG CGTCGCGCAG
GCGCAATATG CCGAAGCCAG GGCGCGCAAC GCGCGGCTCA ACATCGTCGC TCCCGCCGCG
GGGCTGGTGC TGACGCGGCA GGTCGAACCC GGCCAGATCG TCGGCGCGGG CAGCGGCGTG
TTGTTCCGCA TGGCGCGCGG CGGCGAGATG GAGATGCTGG CGCAGATGGC CGAAGCCGAT
CTGGCCCGCG TGCGCGTCGG CACACGCGCG ACGGTGACGC CGGTTGGCAC CGACGTCGAG
ATTCCGGGGC AGGTGTGGCA GGTGTCGCCG GTCATCAACA TGGACACGCG CCAGGGCATG
GTGCGGATCG CCATTCCCTA TTCGTCGGTG CTGCGTCCCG GCGGCTTTGC CGACGCGCGC
CTCGTGTCGG GCACGGCCGA GCTGCCGTTG CTGCCCGAAA GCGCGGTGCA GAGCGGACCC
GAGGGCAATT ATGTGCTGAT CGTCGGCAAG GACAACAAGA TCGAGCGCAA GCCCGTCAAG
GTCGGCACGG TCAGCGACGC GGGCGTGTCG ATCGCGTCGG GGCTCACCGG CAACGAACGG
GTGGTGACGC TCGCCGGCGC CTTCCTCAAC GTCGGCGACA CGGTGAAGCC GGTGCTGCAG
AAATCATCGC AATAA
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| Protein sequence | MPGRDFGVNY ERKVDSMDSL AGTQSFYEEA DDSRRKRTRL IVAVVLIVLA LAAAYYAFSS
GRGAADAGGG EEATVPNITV VIPGRVSVEA VITTNGTIAA RREMPVGVAG EGGQVERVLV
EPGQWVDAGQ TLAVIDRSVQ SQQAASLAAQ IRVAQADANL AQAELERAEA LVSRGFISKA
DMDRKRATRD AANARVRVAQ AQYAEARARN ARLNIVAPAA GLVLTRQVEP GQIVGAGSGV
LFRMARGGEM EMLAQMAEAD LARVRVGTRA TVTPVGTDVE IPGQVWQVSP VINMDTRQGM
VRIAIPYSSV LRPGGFADAR LVSGTAELPL LPESAVQSGP EGNYVLIVGK DNKIERKPVK
VGTVSDAGVS IASGLTGNER VVTLAGAFLN VGDTVKPVLQ KSSQ
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