Gene Sala_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0458 
Symbol 
ID4080947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp470427 
End bp470909 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID638008816 
Producthypothetical protein 
Protein accessionYP_615512 
Protein GI103485951 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.836098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA AATTCAGGGT CGCGGCGCGG ATCGCCAAGC CGATCGACGA GGTGTTCGAG 
GCGGTCGCCG ACCCCGCAAA GCTGTCGGCT TATTTCACCA CCGGGGGCGC GAAGGGACGG
CTGGAAACCG GCGCGACGGT GACATGGGAT TTCCACGACT ATCCCGGCGC CTTTCCGGTT
TATGTGATCG AAGTGGTGAA GGACGAACGC ATCGTCCTCG AATGGCAGGC GAGCGAGGGC
GAGGCGCCGA ATGTCGAGGG CGGCGAGCTG GCCGACGCCG ATTACCGCAC GCGCGTGACG
ATGAGCTTCA AGGCGCTCGA CGACGGACGC ACGCTGGTCG AGATTTCCGA AGAGGGCTGG
CGCGAAAATC AGGCGGCGCT CAGCGCTTCC TATGGCAATT GCCAGGGCTG GGCGCAGATG
CTCTGTGCGC TGAAGGCATG GATCGAGCAC GGCATCAATT TGCGCGCCGA CATGTATAAA
TAG
 
Protein sequence
MELKFRVAAR IAKPIDEVFE AVADPAKLSA YFTTGGAKGR LETGATVTWD FHDYPGAFPV 
YVIEVVKDER IVLEWQASEG EAPNVEGGEL ADADYRTRVT MSFKALDDGR TLVEISEEGW
RENQAALSAS YGNCQGWAQM LCALKAWIEH GINLRADMYK