| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0456 |
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| Symbol | |
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| ID | 4080945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 467931 |
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| End bp | 469769 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008814 |
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| Product | peptidyl-dipeptidase A |
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| Protein accession | YP_615510 |
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| Protein GI | 103485949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA TGATCTCGAC GCTGTCGCTT GCCCTGTCGC TCGCGGTGGC GAGCCCCGCC
TTTGCGCAGG CGGCGCCCGC CGCGACTCCC GCCGCCGCCC CCACCGCCGC CGAGGCCGAA
GCCTTTATCG CCGCGGCGGA GAAAGACCTG TTCGACTATA CCGTCGAGGC CGCCCAAGTG
AACTGGGTCA ATGCCACCTA TATCACCGAG GACACCGACG CGATGGCGGC GCGGATCAAC
GCGGTCGGCA CCGAAAAGGC GGTGAAATAT GCACTGGAAG CCGCGAAATA TAGCGATGTT
CCGGGGCTGA GCGCCGAAAC GAAGCGCAAG CTCAACATCC TGCGCACGGG CCTCGTGCTG
CCCGCGCCGA CGACGCCGGG CGCCGCGACC GAACTCAACC GGATCGCGAC CGACCTGCAG
TCGCAATATG GCAAGGGCCG CGGCACGCTG AACGGCAAGG AAATCGCCGG TTCGGATATC
GAGGCGGAGA TGGGCAATCT GGAACGCACC CCTGTCGAAC TCGCCGAAAT GTGGACGAGC
TGGCACGACA ATGTCGGCGC GCCGATGAAG CAGGATTATG CCCGCATGGT CGCCATCGCC
AACGCGGGCG CGAAGGAACT GGGCTTTGCC GACACCGGTG CGATGTGGCG GTCGGGCTAT
GACATGCCGC CCGAAGAGTT TGCCAGGCTG ACCGAAAAAA TCTGGCAGGA CATGAAGCCG
CTCTATGTCG CGCTCCACAC CTATGTCCGC TGGAAGCTCA ACGAGAAATA TGGCGACGCG
GTGCAGCCCA AGACGGGACC GATCCGCGCC GACCTGCTCG GCAATATGTG GGCGCAGGAA
TGGGGCAATA TCTATCCGCT CGTCGCGCCG CCGGGAACGG GCGATCTGGG CTATGATATC
GGCGAGCTGC TCGCGGCGCA GGGCAAGACG CCGCTCGACA TGGTCAAGAT CGGCGAGAAT
TTCTATTCGT CGCTGGGCAT GGCGCCGCTG CCCGATACAT TCTGGAAGCG GAGCATGTTC
ACCAAGCCCG CCGACCGCGA AGTCGTCTGC CACGCCTCGG CGTGGAACAT CGACAACAAG
GACGATATTC GCATCAAGAT GTGCATCAAG GTGAATGCCG ACGATTTCGT CACCATCCAC
CACGAGCTGG GCCACAATTA TTACCAGCGC GCCTATAACC AGCAGCCGTT CCTGTATCTG
AACGGCGCCA ACGATGGCTT TCACGAAGCG ATCGGCGATT TTGTCGCGCT GTCGATCACG
CCGCAATATC TGGTCGACAT CGGCCTGCTC GACAAGGCGA AGGTGCCGAG CGCCGACAAG
GACATCGGCC TCCTGCTGCG GCAGGCGATG GACAAGGTCG CCTTCCTGCC GTTCGGCCTG
CTCATCGACC GCTGGCGCTG GGGCGTGTTC GACGGGACGA TCCAGCCCGC CGATTACAAC
AAGGCGTGGA CCGAGATGCG CACCCGATAT CAGGGCATCG TTCCCCCGGC GGCCCGCCCC
GCCGATGCAT TCGATGCGGG GGCGAAATAT CACATTCCTG GCAACACCCC CTATACGCGC
TATTTCCTCG CGCGCATCCT GCAGTTCCAG TTTTACGAGG CGGCGTGCAG GCAGGCGGGG
TGGAAGGGGC CGCTTCACCG CTGTTCCTTC TATGGCAACA GGGAGGTCGG CGCGAAGCTC
AACGCGATGC TGGAGATGGG GGCGTCGAAG CCGTGGCCCG ATGCGCTCGA AGCCTTCACC
GGCAAGCGCG AGATGTCGGG CAAGGCGATG GCCGATTATT TCGCACCGCT GAAAAAATGG
CTCGACGAGC AGAACAAGGG CAAGCCGCAG GGGTGGTGA
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| Protein sequence | MKAMISTLSL ALSLAVASPA FAQAAPAATP AAAPTAAEAE AFIAAAEKDL FDYTVEAAQV
NWVNATYITE DTDAMAARIN AVGTEKAVKY ALEAAKYSDV PGLSAETKRK LNILRTGLVL
PAPTTPGAAT ELNRIATDLQ SQYGKGRGTL NGKEIAGSDI EAEMGNLERT PVELAEMWTS
WHDNVGAPMK QDYARMVAIA NAGAKELGFA DTGAMWRSGY DMPPEEFARL TEKIWQDMKP
LYVALHTYVR WKLNEKYGDA VQPKTGPIRA DLLGNMWAQE WGNIYPLVAP PGTGDLGYDI
GELLAAQGKT PLDMVKIGEN FYSSLGMAPL PDTFWKRSMF TKPADREVVC HASAWNIDNK
DDIRIKMCIK VNADDFVTIH HELGHNYYQR AYNQQPFLYL NGANDGFHEA IGDFVALSIT
PQYLVDIGLL DKAKVPSADK DIGLLLRQAM DKVAFLPFGL LIDRWRWGVF DGTIQPADYN
KAWTEMRTRY QGIVPPAARP ADAFDAGAKY HIPGNTPYTR YFLARILQFQ FYEAACRQAG
WKGPLHRCSF YGNREVGAKL NAMLEMGASK PWPDALEAFT GKREMSGKAM ADYFAPLKKW
LDEQNKGKPQ GW
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