Gene Sala_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0455 
Symbol 
ID4080944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp466957 
End bp467709 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID638008813 
Productalpha/beta hydrolase fold 
Protein accessionYP_615509 
Protein GI103485948 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG ACCCCCAATT TTTCGAGGCG CGCGACGGCG TGCGGCTGGC GTGGCGTGAA 
ACGGGGGAAG GCCGGCCGGT CGTGCTGCTC CATGGCCTGT TTTCGAGCGG CGAGGTCAAT
TGGATCAAGT TCGGCACCGC GGCGCGCATC GCGGCCGAGG GCTATCGCGT CATCATGCCC
GACCTGCGCG TCCATGGGTC GAGCGACGCG CCGCACGACG CGCAGCATTA TCCGCCCGAC
GTGCTGGTCC GCGACGTGGA GGATCTGGTG GCGCATCTGG GCCTCGTCGA TTTCGACCTC
GGCGGCTTCT CGCTCGGCGC GCGGACCAGC GTGCGTGCGG TCGTCGCGGG GATGAAGCCG
CGGCGCCTGA TTCTGGGCGG CATGGGGCTG GCGGGGCTCG CCGGCTGGCA GCGGCGCGGG
GCGTTTTTCC GGCGCGCAAT CGCCGAATAT GAAACGGCGA AGCGCGGCGA CGACACCTGG
CTGTCGATCC AGTTCATGAA GACGATGAAG GTCGATCGCA TCGCCGCGGG GCATTTGCTG
GAAAGCTTTA CCGACACGCC GCCCGAGGCG CTGGCGGCGC TGACGATGCC GGTGCTTGTC
GTCTGCGGCG AGCAGGATCA GGACAATGGA TCGGCCGAGG AGCTGGTCGC GGTGCTGGCC
GATGCGCGGC TCGCGACGAT TCCGGGGACG CACATGTCGA GCGTGACCGA GCCGGCGCTG
GGTGAGGCGA TCGCGGCCTT CCTGACGGCT TGA
 
Protein sequence
MTIDPQFFEA RDGVRLAWRE TGEGRPVVLL HGLFSSGEVN WIKFGTAARI AAEGYRVIMP 
DLRVHGSSDA PHDAQHYPPD VLVRDVEDLV AHLGLVDFDL GGFSLGARTS VRAVVAGMKP
RRLILGGMGL AGLAGWQRRG AFFRRAIAEY ETAKRGDDTW LSIQFMKTMK VDRIAAGHLL
ESFTDTPPEA LAALTMPVLV VCGEQDQDNG SAEELVAVLA DARLATIPGT HMSSVTEPAL
GEAIAAFLTA