| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0452 |
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| Symbol | groEL |
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| ID | 4080941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 463029 |
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| End bp | 464672 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008810 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_615506 |
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| Protein GI | 103485945 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.992131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA AGGACGTTAA ATTTTCGCGC GACGCGCGCG AGCGCATCCT GAAGGGCGTC
GACATCCTCG CCGACGCCGT CAAGGTCACC CTCGGTCCCA AGGGCCGCAA CGTCGTGATC
GACAAGAGCT TCGGCGCGCC CCGCATCACC AAGGACGGCG TCAGCGTCGC CAAGGAAATC
GAACTCAAGG ACAAGTTCGA GAATATGGGC GCGCAGATGC TGCGCGAAGT CGCCAGCAAG
GCGAACGACA AGGCCGGCGA CGGCACCACC ACCGCGACCG TGCTTGCCCA GGCGATCGTG
CGCGAAGGCA TGAAGTCGGT TGCCGCCGGC ATGAACCCGA TGGACCTGAA GCGCGGCATC
GACCTCGCGG TCACCAAGGT CGTCGAAGAC CTCAAGGCCC GTTCGACCCC GGTTTCGGGT
TCGTCGGAAA TCGCGCAGGT CGGCATCATT TCGGCCAACG GCGACGTCGA AGTCGGTGAA
AAGATCGCCG AAGCGATGGA AAAGGTCGGC AAGGAAGGCG TCATCACCGT CGAGGAAGCC
AAGGGCCTCG AGTTCGAACT CGACGTCGTC GAAGGCATGC AGTTCGACCG CGGCTATCTG
TCGCCTTACT TCATCACCAA TCCGGAAAAG ATGATCGTCG AACTGACCGA TCCCTATATC
CTGATCTTCG AAAAGAAGCT GTCGAACCTC CAGTCGATGC TGCCCATCCT CGAAGCCGTG
GTGCAGTCGG GCCGTCCGCT GCTCATCATC GCCGAGGACA TCGAAGGCGA AGCGCTCGCG
ACCCTCGTCG TCAACCGCCT GCGCGGCGGT CTGAAGGTTG CTGCGGTCAA GGCGCCGGGC
TTCGGCGATC GCCGCAAGGC GATGCTGCAG GACATCGCGA TCCTGACCAA GGGCGAAATG
ATCAGCGAAG ACCTGGGCAT CAAGCTTGAA AACGTCACGC TCAACATGCT GGGCCAGGCG
AAGCGCGTCA CGATCGACAA GGACAACACC ACCATCGTCG ACGGTGCGGG TGACGCCGAA
GCGATCAAGG GCCGCGTCGA ACAGATCCGC GCGCAGATCG AAACCACGAC CAGCGACTAT
GACCGCGAAA AGCTGCAGGA ACGTCTGGCG AAGCTCGCCG GCGGCGTTGC CGTGATCAAG
GTCGGCGGCG CAACCGAGGT CGAGGTGAAG GAGCGCAAGG ACCGCGTCGA CGACGCGCTG
CACGCGACCC GCGCCGCGGT CGAGGAAGGT ATCGTTCCCG GTGGCGGCAC CGCGCTCCTC
TACGCGACCA AGGCCCTCGA AGGGCTGAAG GGCGCCAATG ACGACCAAAC CCGCGGTATC
GACATCATCC GCAAGGCGAT CGAAACGCCG CTGCGCCAGA TCGCGGCCAA CGCCGGTCAT
GACGGCGCGG TCGTCGCGGG CAACCTGCTG CGCGTCGGCG ACGTCGAACA GGGCTTTAAC
GCCGCGACCG ACGTTTATGA AAATCTGAAG GCCGCCGGCG TGATCGACCC GACCAAGGTC
GTACGCACCG CGCTTCAGGA CGCCGCGTCG GTGGCGGGCC TGCTCATCAC CACCGAAGCG
GCGGTGAGCG AGCTGCCCGA AGACAAGCCG GCGATGCCGA TGGGCAGCGG CGGCATGGGC
GGCATGGGCG GCATGGACTT CTAA
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| Protein sequence | MAAKDVKFSR DARERILKGV DILADAVKVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI
ELKDKFENMG AQMLREVASK ANDKAGDGTT TATVLAQAIV REGMKSVAAG MNPMDLKRGI
DLAVTKVVED LKARSTPVSG SSEIAQVGII SANGDVEVGE KIAEAMEKVG KEGVITVEEA
KGLEFELDVV EGMQFDRGYL SPYFITNPEK MIVELTDPYI LIFEKKLSNL QSMLPILEAV
VQSGRPLLII AEDIEGEALA TLVVNRLRGG LKVAAVKAPG FGDRRKAMLQ DIAILTKGEM
ISEDLGIKLE NVTLNMLGQA KRVTIDKDNT TIVDGAGDAE AIKGRVEQIR AQIETTTSDY
DREKLQERLA KLAGGVAVIK VGGATEVEVK ERKDRVDDAL HATRAAVEEG IVPGGGTALL
YATKALEGLK GANDDQTRGI DIIRKAIETP LRQIAANAGH DGAVVAGNLL RVGDVEQGFN
AATDVYENLK AAGVIDPTKV VRTALQDAAS VAGLLITTEA AVSELPEDKP AMPMGSGGMG
GMGGMDF
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