| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0450 |
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| Symbol | |
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| ID | 4080939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 460587 |
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| End bp | 462050 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008808 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_615504 |
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| Protein GI | 103485943 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.144048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.622728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAGG ATATTCGCAG GCGCCGGATC GTTCCGCTGA TGGGAGCGCT GTCGGTGCTG
ATCGCACCCG AACTGGCGTG GGCGCAGGAG GGCGCGGCCT CCGCGACGGG TGGCCTCGAC
GAAATCGTCG TCACGGCGCG CAAGCGCGAG GAGAATCTCC AGTCGGCGCC GCTGTCGGTC
GCGGCTTTCA GCGGCGATAC GCTGGCCAGG GCCGGGATCG ACGAGTTCGC GGAGATAGCG
ACCCGGGTAC CGGGCTTCAC ACTCAATCCG GACAATGTCT CCGAACCCAA TATCTTCCTT
CGCGGGATCG GAACCGACAT CGAAAGCGCC GCGTCGAGCG CCGCGATCGG TTTTTTCCTG
AACGATGTCT ATTTGCCGCG CGCGTCGGGC ACCGCGATCG AACTGTTCGA TCTGGAGCGC
GTCGAGATTG TGCGCGGCCC GCAGGGCACG CTCTATGGCA AGAATGTCGT TGGCGGCGCG
ATCAACTTCA TCACCCGAAA GCCGACCGAC GCATTTCGTG CGGGGGTCGA GGCGGGGATC
GGCAACTATG GCTCGTTCGA CGTGAAAGCG ACGATCGCGG GCGGCATCGG CGAAGGGTTG
TCGGGCAGCC TGGCCGCGGC CGCGCGGCGC CGCGACGGTT TTGCCTTCAA CAGCTTCACG
GGCAATGACG TCGAGGATCT GTCGGCCTTC GGCCTGATGG GCCAGTTGCG CTATCAGCCC
GGCGACAGCC TCGACATTCT GCTTACGGGC GATCTGACGC GGCGGCGGGC GCGGGGCAAA
TGGGTCGACA TCCAGACGCC GTCGACGCAC AATATCCCCT TCGTGAACCC CGATCCGCGG
CGCGGGCCGA ATAATGTCGA CGGTCGGCAG GACGCCGATC TTGGCGGCAT CCATCTGAGC
GCGAACTGGG ACAGCGGCGC CGGCACACTG ACCCTGATCA GCGCCTACCG CGAGGGCGAT
TTCAGCGTGC TCAACAATGA TGCGGGCAGC TTCATTGATT TTACGCGCCT GGTCTATGAC
GGCAATGGCC GGATCGATTT CCTTGCGATC GACCGCAGCC GGTTCAACGA CGATTATTTC
ATCAACGACA AGGACGCGAT CCACCTGCTC GCCCAGCAAG CCCCACGAGC CCAGGTCCGG
TTCGGCCGCC ACGGCGACCA GCAGCCACTC ACGCTCGGGC GGAAGCCCCG GCTTGTGGTG
CCCGCCCAGC TTGCCCGGCG CGACGCCGCC CGTCCGGCGC TGCCGCTGGA CCGGCGCATC
CGCGCTGGCG ACGCTCCCCC CGACCTGCGG TGCCGTCCCG CGCGCCGACG CGCCCAATGC
CCGCGCGGCA ACCGCCCTTG CCGACGATCA ATCGAATTGG CTCGGCTGGT CCCTGTTGGC
CTCCCGCGCA GCCAACAGGT CGAATCGGAA AATCAACGCT GTCTGAATCC CCAATCGATT
CGCTCAAACA AGAGGGCGCG CTAG
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| Protein sequence | MRQDIRRRRI VPLMGALSVL IAPELAWAQE GAASATGGLD EIVVTARKRE ENLQSAPLSV
AAFSGDTLAR AGIDEFAEIA TRVPGFTLNP DNVSEPNIFL RGIGTDIESA ASSAAIGFFL
NDVYLPRASG TAIELFDLER VEIVRGPQGT LYGKNVVGGA INFITRKPTD AFRAGVEAGI
GNYGSFDVKA TIAGGIGEGL SGSLAAAARR RDGFAFNSFT GNDVEDLSAF GLMGQLRYQP
GDSLDILLTG DLTRRRARGK WVDIQTPSTH NIPFVNPDPR RGPNNVDGRQ DADLGGIHLS
ANWDSGAGTL TLISAYREGD FSVLNNDAGS FIDFTRLVYD GNGRIDFLAI DRSRFNDDYF
INDKDAIHLL AQQAPRAQVR FGRHGDQQPL TLGRKPRLVV PAQLARRDAA RPALPLDRRI
RAGDAPPDLR CRPARRRAQC PRGNRPCRRS IELARLVPVG LPRSQQVESE NQRCLNPQSI
RSNKRAR
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