| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0442 |
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| Symbol | |
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| ID | 4082989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 452936 |
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| End bp | 453865 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008799 |
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| Product | virulence-associated protein E |
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| Protein accession | YP_615496 |
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| Protein GI | 103485935 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.331851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGT TAGACAAAGC TCATCAACTC GAACGCCGAG CCCGCACTAT CGTTGAAAGC
CTTCAGGGTA CATGGAGTCG GGGCAAAGGC ATGTGCTGCT GCCCCGCGCA CGACGATCGA
ACTCCGTCGC TGAGTGTGAC CTTGGGGCGC AAAGCCATCC TGTTTCACTG CTTCGCGGGA
TGCCTGAATG AGGACGTCAT TGCGGCGCTG GATCGCCAAG GCGTTCGCAG CCGCGACCTT
TTCAACGCTT CAGACGCTGA GACCATCGAA AAGCATAGAT ATCGCGACTT CAGTCCCAAT
GCGCGGCGCT TGTGGCAATC GGCGACGGCG AGCTCCGACA GCCCTGCCGT ACAATACCTT
GCGCAGCGCG GTCTTCTGCG CGGATCCGAT CAACTCCGCT ACCTAGCGCG CACGCCGCTC
GGGCCGCGCG GCGCTGTCCA ATTTCTCCCC GCGATGCTGG CCGCAGTAAC AACCGACATT
GGCATAATCG CGGTACACCG AACGTTTCTC GACTTGGCGA GCGGCAAGCT TGCCGCTTTC
GAGCGGCCCA AGCGTGCGCT TGGCACCCTT GGCTGTGGCG CCGTCAGACT GGTGCCGCCG
GTGCAAGGGC GTCTTGGACT TGCCGAAGGT ATCGAGAGCG CCCTGTCAGC CATGCAGCTG
TTCGGAGTCC CGTGCTGGGC AACGCTCGGG AATGAGCGCT TCGGTCTCGT TTCCATTCCG
GAGAGTGTCC GCGAGCTTTT CCTGTTTATC GACAATGATG CCGGAGGCGC TCTCGCCGAG
AAGAGAGCGC TGAAGGCTTA CGCTGCACCT AGTCGTGTCA TCCACTCACG AGTTCCGGCC
TCGCCCGGTT TTGACTGGAA CGATGAGCTG AAGTCCCGGC TTGCCCGTAA ACCTGACCCG
TTGGGCAGAG GGGAGGGGGC CTTCGGCTGA
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| Protein sequence | MPPLDKAHQL ERRARTIVES LQGTWSRGKG MCCCPAHDDR TPSLSVTLGR KAILFHCFAG
CLNEDVIAAL DRQGVRSRDL FNASDAETIE KHRYRDFSPN ARRLWQSATA SSDSPAVQYL
AQRGLLRGSD QLRYLARTPL GPRGAVQFLP AMLAAVTTDI GIIAVHRTFL DLASGKLAAF
ERPKRALGTL GCGAVRLVPP VQGRLGLAEG IESALSAMQL FGVPCWATLG NERFGLVSIP
ESVRELFLFI DNDAGGALAE KRALKAYAAP SRVIHSRVPA SPGFDWNDEL KSRLARKPDP
LGRGEGAFG
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