| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0438 |
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| Symbol | |
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| ID | 4082985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 446826 |
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| End bp | 448373 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008795 |
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| Product | phage integrase |
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| Protein accession | YP_615492 |
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| Protein GI | 103485931 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCAA GATCATTATT GTCGTTTCGA GCGGCCCGGC TCCGGGTCGA AGACCCGCCC
AGTCACGACG CTCTACTCAC CGCATTCCTC TCCTCTCTGT CGCTCGACGA GAGGTCAGGC
AGTGCGATTC TGTTTGGCGC TGCGGCCCGT CATTTCCTGC ATTGGATGGA ACTGCATGGG
ATCGCGATCC GCACGATCGA CGATCGGACC GTTCGGCGGT TCGAGAAGCA TCGGTGCCGT
TGCCACCGGT ATTCGGCGCA GCAGCCAGTC TATAAGGCGG ACATTGCAGC GCGAGTCAGG
CGCTTCGTCC GCTTCCTGGA GGATCAAGGC TACGTCGGTG TCGACGACGG GATCGACGAT
CTGCCACGGC ACCTCGCCGA CTATTTCGAT GGGATCGATC GCTTGCAACT CGCGCAAGGA
CCGGCCCAGT CCTATCGATC CGAGGCCGAG CATTTCGCGG CCTGGCTTCG CATTGCGCGA
CGACAATGGG CCGATATCGA TGACACGATC ATCGACCAGT ACGGCGCGCA TGATTGTCGA
TGTCCGGTCT GGCGCAAGCG AGGCAAGCTT GTTGCCTCGG GCGCGAAGCG GCGGCGGCGA
GGCGCTCGGC ACTTCGTCGA GTTCTTGCGC GACCGCGGTG TCATCCCTTC AGTCGAACTG
GTGTCGGATG ACGACCCGCA CATGGCGGCA TATCTGGCAT GGCTCAAGCA ACACCGCGGC
GCGACCGATG AGACGATCCG GCGCTACCGG GCCGATATCA GGCGGCTCGC GCCTATGCTC
GGCGAGCCTT CACAATGGGA TGCAGCCGTC CTCAGACGGG CGTTTCAACA ACGAAGCAAG
GAGACGCCGG GTTCGGCATC ACTGCTCGTC ACGATAATAC GGAGCTATAT TCGGTTCCTG
GTCGTGCAGG GTATTTGCCG TCCAGCTTTG TTGCACGCGA TCCCATCAGT GCAACGCTAC
CGTCTTTCGA CGCTGCCCCG GCACGTTAAC CCGGCAACGA TCGAGCAGAT CATCGGCGCA
TGTCCGACTG ATCGCCCGGT GGAAGTTCGG GACAAGGCCA TCATTCTCCT GCTCGCCCGG
CTTGGCCTGC GTGCCGGTGA TATTCGGGAT ATGCACCTCG ACGATATCGA CTGGCGCTCG
GGCCACCTGA CGGTCAAGGG CAAGACGCGT CGGCCTGATC GCCTGCCATT GCCTCAGGAC
GTCGGTGACG CGATCCTGGA CTACATTGCC ACGGCGCGTC CCAAGACCGC CGATCCGCAT
CTGTTCGTGC GCGCGCAAGC CCCGTTCCGT TCGTTCCGCT CATCGGCGGA GATCGCCGGC
ATCGTTGCAC GCACGCATGA GCGCGGCGGG ATCGAAGGCG TGCCGACCGG ATCGCACATT
TTCCGGCATT CGCTTGCCAC CAACTTGCTG CGCGCGGGCG CAGGGCTGGA GTCCGTTGGA
ACGATCCTGC GCCACAGCTC GCCCGAGACC ACCGCCATCT ACGCCAAGGT CGACCTGCCG
ATGCTCATGA AAATCGCGCA GCCATGGCCG GGAGAACCGT CATGCTGA
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| Protein sequence | MRSRSLLSFR AARLRVEDPP SHDALLTAFL SSLSLDERSG SAILFGAAAR HFLHWMELHG
IAIRTIDDRT VRRFEKHRCR CHRYSAQQPV YKADIAARVR RFVRFLEDQG YVGVDDGIDD
LPRHLADYFD GIDRLQLAQG PAQSYRSEAE HFAAWLRIAR RQWADIDDTI IDQYGAHDCR
CPVWRKRGKL VASGAKRRRR GARHFVEFLR DRGVIPSVEL VSDDDPHMAA YLAWLKQHRG
ATDETIRRYR ADIRRLAPML GEPSQWDAAV LRRAFQQRSK ETPGSASLLV TIIRSYIRFL
VVQGICRPAL LHAIPSVQRY RLSTLPRHVN PATIEQIIGA CPTDRPVEVR DKAIILLLAR
LGLRAGDIRD MHLDDIDWRS GHLTVKGKTR RPDRLPLPQD VGDAILDYIA TARPKTADPH
LFVRAQAPFR SFRSSAEIAG IVARTHERGG IEGVPTGSHI FRHSLATNLL RAGAGLESVG
TILRHSSPET TAIYAKVDLP MLMKIAQPWP GEPSC
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