Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0428 |
Symbol | |
ID | 4082380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 433473 |
End bp | 435461 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008785 |
Product | parB-like partition proteins |
Protein accession | YP_615482 |
Protein GI | 103485921 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.62662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.628869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGT CGATCCCGCT GAACAAGCTC GTCCAGTCTC CCCGCAATGT TCGCCGTCAC AGTGACCCGG CATCAGACGC CGAGCTCAAG GCAAGCATCG CAGCCTGTGG CCTGCTACAG AACCTCATCG TGAGGCCCAC CGCCAAGGCC AAGTTCGAGG TCGAAGCCGG TGAGAGGCGT CGGCGCGCAA TGCTCGCGCT TGCAGACGAA AAGATCCTTG CCCGCGATCA CGAAGTCACC TGCCTCGTGC TCGAAGACAG CGCTGAGGTC GCGGTCGAGA CCAGCCTTGC GGAGAACTTT CACCGCCTCG CCATGAACCC GGCCGACGAA GCCCAGGCCT TTGCCGCGCT CGTGGCAGGC GGTGCGACCG TCGAGGACGT CGCGCGCCGC TTCGGTCTGA CCGTTCGCTT CGTTGATGGC CGGCTGCGTC TCGCGAACCT TGCGCCTGTG GTGTTTGAGG CACTGGCCTC CGGGGAAATC ACCCTCGATA TCGCCAAGGC CTTCGGCGCG ACCTCGGACC AGGACATCCA GGCCCGGGTG TTCGAGCAGG TTTCCTCGGC CTACTACGCA CCCAATCCCG ACAGCATCCG GCGCATGGTC CTCTCCGGCA CAGTCCGGGG CAGCGATCCG CGCGCCCGTC TCGTTGGCCG CGATGCCTAC ATTGCCGCGG GCGGCCGGAT CGAGCGTGAG CTGTTCGACA ACGACGACAG CGAATCCTGG GTCGATGTTG CGCTGCTCGA AAGCCTAGCG GCGGCAGAGA TGGAAGAGCA GGCCAAAGCC CTCGCCACCG AGCAGGGTCT TGCCTGGGTG AAGCCAACGC TTGATCCCTA CGCCAGCCAC GATCTGGTCG AAGGGCTGGT CCGGCTTCCT GCCGACCCGG CGCCGATGAC CGAAGCCGAA TTGGCAAGGC TCGACGAACT CGATGCCTCC TATGACGAAC ATGCGGCTAT CCTCGAAGAT GAGGACAGCG CCGAGGAGGC TGTGGCAGCG GCCGAAGCGG CAATCGAGGC GATCGAACGC GAGTGTCAGG ACATTCGCGC CCGCCCGCCC GTCATCGCGC CCGAGCTCAA GGCCGAGGCA GGGATGATCC TGGTGCTCTC GCGTGATGGG ACGCCGGTTC TCCAACCGGT GTTCTACGGC GAGCGTCAGG CTGATCCCGC GGAAGCTGAC GATGGGATCG AAGTCGTTGC CGGCGATGAA GGTTCGGACA GGCGCCGGAC GACTTTGTCG AAACGTCTGG TCGACGAACT CGCGATGCAG CGTCGCGATA TTCTGGCACT TCACGTTGCG TCCGATCCCG GGCTGGCGCT CGACATCATG GTCTTCACCC TCGCCGATTC CGATACCCAC GATTGGCGGG CGCGCCCTTC GACCACGCTG CGCGCGCCTG TTCCGGCAGG CCCGATCATC GGCTTCGAAG CCAAGGATGC GCCAGCGAGC AGCGCGCTTG CCGAGCTCAG GTCCGGTCTC GACGAAAGCT GGCGCGCCGG TGCCAATGCA ACGTCCCGCT TCGACCTGTT TCGGGCGCTG TCCGATGACA GCCGCGCCGC GTGGCTGGGC CATGTCGTTG CCCGGTCGCT CGAGGCCAGC CTCAACATGG AAGGTGAGCG TCAGCTGCCA TTCCAGGATC ATCTCGGCAG CCTGATCGGC ATCGACATGG CGCAGTGGTG GCGTCCGACG GCGGCCAATT ACTTCGATCG GGTATCGAAG CAGGTGATCC TCGACGCGCT GACCGACGTC GGCGGTCTCG AGCTCTCCTC CCGCTTTGCC TCGGTCAAGA AGGGTGACCT CGCGATGAGT GCCGAACGCG TCTTCGCCGG CACTTACATC ACCGAGGTCG AAGTACGCGA GAAGGCCCTG GCCTGGGTGC CTGAGGTCCT GCGGTTTGCC TCCGCTGCCC CGGAGGCTGG CGAAGCCGAG ATCGACGCGA CCGACGCTGA CCCCGGTGAC GATACCGAAG ATCAGTCCCC CCGCGAGTTG GCCGCCTGA
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Protein sequence | MIKSIPLNKL VQSPRNVRRH SDPASDAELK ASIAACGLLQ NLIVRPTAKA KFEVEAGERR RRAMLALADE KILARDHEVT CLVLEDSAEV AVETSLAENF HRLAMNPADE AQAFAALVAG GATVEDVARR FGLTVRFVDG RLRLANLAPV VFEALASGEI TLDIAKAFGA TSDQDIQARV FEQVSSAYYA PNPDSIRRMV LSGTVRGSDP RARLVGRDAY IAAGGRIERE LFDNDDSESW VDVALLESLA AAEMEEQAKA LATEQGLAWV KPTLDPYASH DLVEGLVRLP ADPAPMTEAE LARLDELDAS YDEHAAILED EDSAEEAVAA AEAAIEAIER ECQDIRARPP VIAPELKAEA GMILVLSRDG TPVLQPVFYG ERQADPAEAD DGIEVVAGDE GSDRRRTTLS KRLVDELAMQ RRDILALHVA SDPGLALDIM VFTLADSDTH DWRARPSTTL RAPVPAGPII GFEAKDAPAS SALAELRSGL DESWRAGANA TSRFDLFRAL SDDSRAAWLG HVVARSLEAS LNMEGERQLP FQDHLGSLIG IDMAQWWRPT AANYFDRVSK QVILDALTDV GGLELSSRFA SVKKGDLAMS AERVFAGTYI TEVEVREKAL AWVPEVLRFA SAAPEAGEAE IDATDADPGD DTEDQSPREL AA
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