Gene Sala_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0424 
Symbol 
ID4082376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp430090 
End bp430551 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID638008781 
Producthypothetical protein 
Protein accessionYP_615478 
Protein GI103485917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.114927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.342394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA TCGAGGCCGT GATGGCCGAC TTTGCCGTTC GTCAGGCCCA GCGGCAGGCC 
CAGGTAGTCG AAGAGATTCA GCAGCTCAAG ACCGTCATTC TCCCGCGCTT GCAGGAAGCC
GGAATCGCCC GCGTCGAGAT CCGCTTTGAC GGCTGCGGCG ACAGCGGTGC TGTTGAGGAA
TGCGCGTGCC TCGATGCCGC TGGTGCCGCG ATCGCGTGCC CCGATGTCAC CATTCTGGAA
GACGAAGCAG GCAACTCGGA TGGTGACGGT TCCGCGGAGC TGCACTCACT CGGCCAAGCT
CTCGAGCAGC TGACCTATCT GGCGCTCGAA CGTCACCATC CTGGCTGGGA GATCAACGAC
GGTGCCTGCG GCGAACTGGT GATCGATGTG GCTGAAGCGA CCTTCGTGCT CGACTGCAGC
CTGCGCTTCA TCGCTACCGA TGATCACTCG ACCGAGCTCT AG
 
Protein sequence
MIDIEAVMAD FAVRQAQRQA QVVEEIQQLK TVILPRLQEA GIARVEIRFD GCGDSGAVEE 
CACLDAAGAA IACPDVTILE DEAGNSDGDG SAELHSLGQA LEQLTYLALE RHHPGWEIND
GACGELVIDV AEATFVLDCS LRFIATDDHS TEL