Gene Sala_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0422 
Symbol 
ID4082374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp428957 
End bp429379 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content61% 
IMG OID638008779 
Productsingle-strand binding protein 
Protein accessionYP_615476 
Protein GI103485915 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.185373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.206127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGG AATGCTCGAT CAGGAGAAAG CCCATGACCA ATCTCGTTAT CCTCGTTGGC 
CGTATCGCTC GCGACCCCGA AACCCGCACC ACCCAGGGTG GAACCAGCAT CACCTCGATC
TCGGTCGTGA CCGATCGGCC CGCCCGCAAG GATGGCAAGA CCTACAAGGA CAAAAACGGC
TACACCGCCA AGGACAGCGA ATTCCACCGG ATCACCTGCT TCAACGGCCT GAGCCAGAAC
GTCGCCAAGT ATTGCACCAA GGGCCAGCTC GTGACGGTCG AAGGCCGCAT CCACTACACG
CAGTGGGAGG ATCAGAGCGG CGCCAAGCGC TACGGCTGCG AGATCATCGC CGACAAGGTC
GACTTCCTCA CCAAGGGCCG TTCGGGCGGC AACGAGGGAG CACCCGATAT CGACGAGGAC
TGA
 
Protein sequence
MDPECSIRRK PMTNLVILVG RIARDPETRT TQGGTSITSI SVVTDRPARK DGKTYKDKNG 
YTAKDSEFHR ITCFNGLSQN VAKYCTKGQL VTVEGRIHYT QWEDQSGAKR YGCEIIADKV
DFLTKGRSGG NEGAPDIDED