Gene Sala_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0411 
Symbol 
ID4081730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp420935 
End bp421555 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content58% 
IMG OID638008769 
Producthypothetical protein 
Protein accessionYP_615466 
Protein GI103485905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.152278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.774249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA AGGGGGCGAT GGAGGGAAAA AGGCCGCGCA TTCGTGAGAT CGTATGGCTC 
GCTGGCATCC TTGCCGCGTT GGTCTTGGGA TATGCGCTCT ACCACCAGCT CTATGTCGGC
GCGTCCAGCT TTCCTTTCGT GCAGGAAACT ATCCTTGTCT TCCTTGGCGC TCTCGCGACG
ATCTTTCTTA CCGCGATGCT GCTCAACCGC CAGACCGAGC TCGAGCTCAG CAAGGAGGCC
CGCGTCCATC TGTTCGACCA GAAGAACTCG GTTTACATGT CGGCGATCGA AAAGGTCGCG
GAAATCGCCG AACAACGCGA TCCCGATCCG GCTCTCATCG ATGAATTGCG GGTTATCGGA
CACAAACTGG CAGTGATCGC CAGTCCCGAG GTGATCAAGT CCTTCCAGTC GGTGCTCGAC
AAGCTTATAC GCGGATTACG GGACGGAAAC CTGACCAATG CCGACGCAGA AGAGGTGATG
CACGCCGTCG CCGAGCTGAC CATCGGAATG CGATCCGACA TGCTTGACGA GATCGGGAGC
GCCAAGAATG ACACCGCACA GGAACTGATC CGCCGCAACT CTCGGCAGAT GGAACGGCTC
GATGATCTGG ACGAAGCGTA A
 
Protein sequence
MTAKGAMEGK RPRIREIVWL AGILAALVLG YALYHQLYVG ASSFPFVQET ILVFLGALAT 
IFLTAMLLNR QTELELSKEA RVHLFDQKNS VYMSAIEKVA EIAEQRDPDP ALIDELRVIG
HKLAVIASPE VIKSFQSVLD KLIRGLRDGN LTNADAEEVM HAVAELTIGM RSDMLDEIGS
AKNDTAQELI RRNSRQMERL DDLDEA