Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0402 |
Symbol | dnaK |
ID | 4081721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 411015 |
End bp | 412946 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638008760 |
Product | molecular chaperone DnaK |
Protein accession | YP_615457 |
Protein GI | 103485896 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.362768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.130805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAG TTATCGGTAT CGATCTCGGA ACAACCAACA GCTGCGTTGC CGTTATGGAA GGCGGCAAGC CCAAGGTGAT CGAGAATTCG GAGGGTGCGC GCACCACGCC ATCGATCGTC GCCTTCACCA AGGATGGCGA ACGCCTGATC GGCCAGCCCG CCAAGCGCCA GGCCGTTACC AACCCGGATA ACACCTTGTT CGCGATCAAG CGCCTGATCG GTCGGCGGTT TGACGATCCG ACCACCAAGA AAGACATGGA ACTTGTTCCA TACAAGATTG TCGAGGGGCC CAACGGCGAT GCTTGGGTTG AAGCGGCCGG CGAGAAGTAC AGTCCTTCCC AGGTTTCCGC CTTCATCCTG CAAAAGATGA AGGAAACCGC CGAAGAGTAC CTAGGCGAGA AGGTCGAGAA AGCGGTAATA ACAGTCCCGG CCTACTTCAA TGATGCCCAG CGCCAGGCGA CCAAGGATGC CGGTAGAATC GCTGGTCTCG AGGTCGAGCG CATCATCAAC GAACCGACTG CGGCGGCGCT CGCTTATGGT CTCGACAAGG ATGAAGGCAA GACTATTGCC GTTTACGACC TCGGCGGCGG TACGTTTGAC GTATCGATCC TCGAAATCGG TGATGGCGTA TTCGAGGTGA AATCGACCAA TGGCGACACC TTCCTCGGCG GCGAAGACTT CGACAGCGCG GTGGTGGAAT ATCTCGCCGA TTCCTTCAAG AAGAAGGAAA ATATGGACCT CAGAACCGAC AAGCTCGCCC TGCAGCGCCT CAAGGAAGCG GCGGAAAAGG CCAAGATAGA GCTGTCAAGC GCAGCACAGA CCGAAATCAA CCTTCCCTTT ATTACTGCGC GCATGGAAGG CGGCACCACG ACGCCGCTGC ATTTGGTCCA GACAGTCACC CGCTCCGAAC TCGAAAAACT GGTTGACGGT CTGATCAAGC GCACGCTCGA ACCCTGCAAA AAAGCTATGG CTGATGCTGG GATCGACAAA GGGGCGATAG ACGAAGTGAT ACTGGTGGGC GGCATGACGA GAATGCCCAA GGTACGCGAA GTGGTCGAGG ATTTCTTTGG CAAGAAGCCG CACACTGGCG TTAACCCCGA CGAGGTTGTC GCCATGGGTG CCGCCATCCA GGCGGGTGTC TTGCAGGGCG ACGTCGAGGA TGTTCTCCTG CTCGACGTGA CCCCGCTGTC GCTCGGTATC GAGACGCTGG GCGGCGTATT CACCCGCATG ATCGATCGCA ACACCACGAT CCCGACCAAG AAAACCCAGA CCTACTCCAC TGCGGATGAC AACCAGCAAG CGGTGACCAT CCGCGTGTTC CAGGGTGAGC GTGAAATGGC GGCGGACAAC AAGCTGCTCG GCCAGTTCGA TCTCGTCGGC ATCCCGCCAG CGCCGCGCGG CGTGCCGCAG ATCGAAGTCA CTTTCGACAT TGACGCCAAC GGCATCGTCA ACGTTTCGGC CAAGGACAAG GGCACCGGCA AGGAACAGCA GATCCGTATC CAGGCATCGG GCGGTCTCAG CGAAGCCGAC ATTGACCAGA TGGTGCGTGA TGCCGAGAAG TTCGCCGAGG AAGACAAGAA GCGGCGTGAA GCCGCCGAGG CTCGCAACCA GGCCGACAGC CTGGTCCATG CGACCGAAAA GCAGCTCGAA GAGCATGGCG ACAAGATTGA TGCCGACACC AAGGCAGCCG TCGAAGCTGC GATCGCCGAA ACCAAGACGG CGCTTGAAGG CGACGATCAC GATGCGATCA ACGCGAAGGC TCAGGCCCTC ACCGACGCTG CCATGAAGAT GGGTCAGCAG ATCTACGAGA AGGAGCAGGC CTCTGCCGCC GGCTCTGCCG ATGCCGGTAG AGCTGCCGGT TCGGAAGCTT CGGATGATGA AGAAGTCGTC GACGCCGAAT TCTCCGAGGT CGATGATGAC AAGAAAGACT AA
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Protein sequence | MAKVIGIDLG TTNSCVAVME GGKPKVIENS EGARTTPSIV AFTKDGERLI GQPAKRQAVT NPDNTLFAIK RLIGRRFDDP TTKKDMELVP YKIVEGPNGD AWVEAAGEKY SPSQVSAFIL QKMKETAEEY LGEKVEKAVI TVPAYFNDAQ RQATKDAGRI AGLEVERIIN EPTAAALAYG LDKDEGKTIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDSA VVEYLADSFK KKENMDLRTD KLALQRLKEA AEKAKIELSS AAQTEINLPF ITARMEGGTT TPLHLVQTVT RSELEKLVDG LIKRTLEPCK KAMADAGIDK GAIDEVILVG GMTRMPKVRE VVEDFFGKKP HTGVNPDEVV AMGAAIQAGV LQGDVEDVLL LDVTPLSLGI ETLGGVFTRM IDRNTTIPTK KTQTYSTADD NQQAVTIRVF QGEREMAADN KLLGQFDLVG IPPAPRGVPQ IEVTFDIDAN GIVNVSAKDK GTGKEQQIRI QASGGLSEAD IDQMVRDAEK FAEEDKKRRE AAEARNQADS LVHATEKQLE EHGDKIDADT KAAVEAAIAE TKTALEGDDH DAINAKAQAL TDAAMKMGQQ IYEKEQASAA GSADAGRAAG SEASDDEEVV DAEFSEVDDD KKD
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