| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0398 |
|---|
| Symbol | |
|---|
| ID | 4081717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 407787 |
|---|
| End bp | 408224 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638008756 |
|---|
| Product | IS66 Orf2 like |
|---|
| Protein accession | YP_615453 |
|---|
| Protein GI | 103485892 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.850618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.274126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACGG GCGGCAAGGT CTGGCTCGCA CTGGGGCACA CGGACATGCG CAGAGGGATG
CGTTCGCTGG CTTTGCAGGT CCAGCAATCG CTGAAGAAGG ACGTCCACGC TGGCGACCTG
TATGTCTTCC GCGGCAAGAA CGGATCGCTG TGCAAGATCC TGTGGCATGA CGGCATCGGC
ATGTCTCTTT ACGCCAAGCG CCTCGAAAAG GGGCGCTTTG TCTGGCCTGC GGCAAAGGAC
GGGACAGTCG CCATCTCGGC CTCGGCGATG GCCAGTCTTC TGGAAGGAAT AGACTGGCGC
AACCCGCAAG GAAACCTGGC GACCAACCCA GGTCGGTTGA TCGCCTGGGC GGCGGCAAAG
TCGAGGAAAT CGTGGGGTTT ATGCCGGTCC TGTGCTATGA AACGGCATGG CTACCGGCGA
GGCATCCAAC GAGCTTGA
|
|---|
| Protein sequence | MPTGGKVWLA LGHTDMRRGM RSLALQVQQS LKKDVHAGDL YVFRGKNGSL CKILWHDGIG
MSLYAKRLEK GRFVWPAAKD GTVAISASAM ASLLEGIDWR NPQGNLATNP GRLIAWAAAK
SRKSWGLCRS CAMKRHGYRR GIQRA
|
|---|
| |