Gene Sala_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0395 
Symbol 
ID4081714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp405475 
End bp405960 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content48% 
IMG OID638008753 
ProductFerritin and Dps 
Protein accessionYP_615450 
Protein GI103485889 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.680559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.268333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGA GGTATGTTAT GGATTCCAAT CTCGATGATC CCAAAAGGAT TGTGGTCGTT 
GATGGCCTGA AAAAATTTCT GGCAGATACT TACACGCTAT ATCTTACAAC CCACAATTTT
CACTGGAACG TGACGGGTCC ACACTTTAAT AGTTTGCATC AAATGTTTAT GGTGCAGTAT
AATGAACTTT GGCTTGCAGT GGATTTGATT GCCGAGAGGC TCCTTACTCT CGGTTCTTTC
GCCCCCGGTT CGTATAAACA GTTTGCGCAA CTGACATCAT TGCCGGATGT GCCCGATTCA
CCACCTGAAG CGATGGAAAT GGTGTCCCTG CTAATGAAAG GCAATCAGTT GGCGGCCCGC
ACTGCGAGAT GCGTTGTTCC TGATGCCGAG GAAATCGGGG ATCAGGCGAC TTCAGATCTG
CTGGTCTCAC GAATTGCGGT CCATGAAAAG GTTGCATGGA TGCTGCGAGC AACTTTGGCG
GGTTGA
 
Protein sequence
MSMRYVMDSN LDDPKRIVVV DGLKKFLADT YTLYLTTHNF HWNVTGPHFN SLHQMFMVQY 
NELWLAVDLI AERLLTLGSF APGSYKQFAQ LTSLPDVPDS PPEAMEMVSL LMKGNQLAAR
TARCVVPDAE EIGDQATSDL LVSRIAVHEK VAWMLRATLA G