| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0388 |
|---|
| Symbol | |
|---|
| ID | 4081975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 401535 |
|---|
| End bp | 402176 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638008747 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615444 |
|---|
| Protein GI | 103485883 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.68163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC GGGAGGATGA TCAAACAGTC GACACGGTTG AAATCCGGGA AGTGGTTGGA
ATTGTTTACA ATCATAACGC TCTTGAAGAA ATGGCAACAC AACTGGTTGC CGCAGGGGTG
GACCGCAATG ACATATCCCT CATGGCCGAT TGGAATACGG TCATCGAAAA ACTCGGCCTG
ACCTATCCCG ATCCGGGCGC GGTCGTCGAT AACCCCGAGA CTCCGAGGCG GCGCCTAACG
ACCAGGGATG AACATGCCAC GGTCACCGGA ACCGTTTTTG GAACCTTGAT TGCGACCGGT
GCCTTAGCAG CCGGAGTACC CATCATAGCT TCAGGAGGTG CAATTCCGCT TGCACTTGCG
GCATGTACTG CTGGCGGCGG AATAGGAGCG ATGTTGGCCA AACTTGTTCG CAAGAATTTG
CTGACGCGGG ATGATGCCGA TGCAATCGAG CATGATATAA ATCGCGGCGG CATTGCAGTT
TTTGTCAGGG TGGATAATGC GGATGAGGAG CAACGCGCAA TCGACATCAT GAGGCGCAAT
GGTGCGCATA ATGTCCACGC TCATACCATC ACATTACGCA AGGAATTGAG CGACCTCCCG
CTTGCAAACG TACAGCCCGA TCCATGGCTA GCCGACGACT GA
|
|---|
| Protein sequence | MSDREDDQTV DTVEIREVVG IVYNHNALEE MATQLVAAGV DRNDISLMAD WNTVIEKLGL
TYPDPGAVVD NPETPRRRLT TRDEHATVTG TVFGTLIATG ALAAGVPIIA SGGAIPLALA
ACTAGGGIGA MLAKLVRKNL LTRDDADAIE HDINRGGIAV FVRVDNADEE QRAIDIMRRN
GAHNVHAHTI TLRKELSDLP LANVQPDPWL ADD
|
|---|
| |