Gene Sala_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0385 
Symbol 
ID4081972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp397236 
End bp398333 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content57% 
IMG OID638008744 
Producthypothetical protein 
Protein accessionYP_615441 
Protein GI103485880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.924853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCT TCATCAGCCT GTCAGTCACA GACAAAACTA CATCGAAACA GGATGCGGCA 
ACCGTGCGCA CGGCGTTGCT GGAGGAAGCT GTCGGGGCCC TTCAACCAAT TTTCGGTGCA
CGCGGAGCAT CTGCTACCCG TATTCAGGCT GTTCTTGGTC GCTCGCCGGA CAAAGATGCG
ACATTCAGCC TGTCGGTGCA TTTGCATTTG CCGGGCCAGA GGATCGTGGC CGTTCACAGT
AAGGGAGACG ATCTGCGTTC ATTGGCCAGG GACGTCATCG ACAAGCTAAC ATCTGCTACT
CGCAGGCATT TGGAAAGACT GGCCCATGGT TCCGAATTCG CCCGCAAAAG GCGGCGCGAG
CGTCTCTACG AGATCACGAC CGGGGCCGAT CAGCGTCCTG AAAGGGAGCG CAGCCTGGTA
GAGGCGAGAC TGGCCGAAAT CCGGCCCAAG TTGGAAACAG CTGCCAGGCG TGAATTGGCC
TATCTGCGTG CCGTGAGCAA ACTTCCAACC GGCTATCCTG AAGCCGCCGA TATCGTTGAC
GAAGCCATCA TGCGCGTCAT TGCGAGCGAT CATGGGGTCG TGGATGCCGG GGAATTAAAG
ATTGCCGCCT TGCGCGAACT CTTCGCGGTG ATCGACGCGG AAATCGCCGC TCAGCAGATT
TCGATGTCGG CTATACCGCT AGACAGCGAA GTGCCTCAAG ATGCAGAAGA TGAAGCGGAG
GCTATGGTCG AAGAGGAATT TTACGAATTC TATCAGCCCG ACGACCATGT CACTTTGGCC
GATGTCCTGC CAGTTGAGCT CTCGCAGACC AAAGTCGCGC TCGATGAGAT GCACGTTGCA
GGCGTGGTCG CGGCTCTGCG CGACCTGCCG AATCTCTGGC GCAGGGTGTT CGTCTTGCGC
CAGCAAGATC TCTTCGCACC GAAGCAGGTT TCGGAAGTGG TCGACCGCGC GCTCGATGAG
ATTGAAGATA TTTTCGAAAA GGTATCCGCC TTTCTGGATG CGCGCCTCGC CGAGTGGGGT
GCCGACTCGT GGGAAGAAAT TTTCCGAAGC AAAGGTTGCC GCTGCTGCCG TCAGGCACCG
ATGCGTACCG GGGTATGA
 
Protein sequence
MAIFISLSVT DKTTSKQDAA TVRTALLEEA VGALQPIFGA RGASATRIQA VLGRSPDKDA 
TFSLSVHLHL PGQRIVAVHS KGDDLRSLAR DVIDKLTSAT RRHLERLAHG SEFARKRRRE
RLYEITTGAD QRPERERSLV EARLAEIRPK LETAARRELA YLRAVSKLPT GYPEAADIVD
EAIMRVIASD HGVVDAGELK IAALRELFAV IDAEIAAQQI SMSAIPLDSE VPQDAEDEAE
AMVEEEFYEF YQPDDHVTLA DVLPVELSQT KVALDEMHVA GVVAALRDLP NLWRRVFVLR
QQDLFAPKQV SEVVDRALDE IEDIFEKVSA FLDARLAEWG ADSWEEIFRS KGCRCCRQAP
MRTGV