Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0384 |
Symbol | |
ID | 4081971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 396334 |
End bp | 396843 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638008743 |
Product | heat shock protein Hsp20 |
Protein accession | YP_615440 |
Protein GI | 103485879 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.502047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGAT TGCTCAACAA GGAGGATTTG GAAATGAGGA CTGCATTTGA TTTGACCCCC TATCGCCGCT CGACGGTCGG TTTCGATCGG CTCTTCGATG CGCTCGAGAA CAGCTTCCGC GCCGAGACGC AGGATGGCTA CCCACCCTTC GACATCGTTC GCACCGGCGA GGACAGCTAC CGGATCACTC TGGCGGTTGC CGGCTTCCGT CCGGACGAAA TCGACATCAC TTCACATCAG AACCAGCTCG TCATCTCCGG TCAGAAGATC GAGAAGGACG AAGACGGTGT TGAATTCGTT CACCGCGGTA TCGCTGCCCG CGCGTTCGAG CGCCGGTTCC AGCTGGCCGA TTATGTCGAA GTGCGCGATG CGGATTACGA GCACGGCATG TTGACGATTT CGCTCCAGCG GATCGTCCCG GAATCGCTCA AGCGGCGCAA AATCGCCATC GGAAGCCGCG AGCATGTCAA TGACGACACG CCGCAGCTGC CCGAAGACAA GGCGGGCTAA
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Protein sequence | MPRLLNKEDL EMRTAFDLTP YRRSTVGFDR LFDALENSFR AETQDGYPPF DIVRTGEDSY RITLAVAGFR PDEIDITSHQ NQLVISGQKI EKDEDGVEFV HRGIAARAFE RRFQLADYVE VRDADYEHGM LTISLQRIVP ESLKRRKIAI GSREHVNDDT PQLPEDKAG
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