Gene Sala_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0384 
Symbol 
ID4081971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp396334 
End bp396843 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content59% 
IMG OID638008743 
Productheat shock protein Hsp20 
Protein accessionYP_615440 
Protein GI103485879 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.502047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAT TGCTCAACAA GGAGGATTTG GAAATGAGGA CTGCATTTGA TTTGACCCCC 
TATCGCCGCT CGACGGTCGG TTTCGATCGG CTCTTCGATG CGCTCGAGAA CAGCTTCCGC
GCCGAGACGC AGGATGGCTA CCCACCCTTC GACATCGTTC GCACCGGCGA GGACAGCTAC
CGGATCACTC TGGCGGTTGC CGGCTTCCGT CCGGACGAAA TCGACATCAC TTCACATCAG
AACCAGCTCG TCATCTCCGG TCAGAAGATC GAGAAGGACG AAGACGGTGT TGAATTCGTT
CACCGCGGTA TCGCTGCCCG CGCGTTCGAG CGCCGGTTCC AGCTGGCCGA TTATGTCGAA
GTGCGCGATG CGGATTACGA GCACGGCATG TTGACGATTT CGCTCCAGCG GATCGTCCCG
GAATCGCTCA AGCGGCGCAA AATCGCCATC GGAAGCCGCG AGCATGTCAA TGACGACACG
CCGCAGCTGC CCGAAGACAA GGCGGGCTAA
 
Protein sequence
MPRLLNKEDL EMRTAFDLTP YRRSTVGFDR LFDALENSFR AETQDGYPPF DIVRTGEDSY 
RITLAVAGFR PDEIDITSHQ NQLVISGQKI EKDEDGVEFV HRGIAARAFE RRFQLADYVE
VRDADYEHGM LTISLQRIVP ESLKRRKIAI GSREHVNDDT PQLPEDKAG