| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0379 |
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| Symbol | |
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| ID | 4081966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 390686 |
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| End bp | 392869 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008738 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_615435 |
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| Protein GI | 103485874 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC GGGTCTTTTC GGCTGCGCTG CTGGGCGGCG CGGCGCTGGC ATTGGCAGCG
TGCAACGCAT CGAAGAATGA AGCCATCGCG GCCGGATCGC TCGACGATGC CGAAAGGGCC
AGCGAGGCGC TGCTCAAGAC CGGCGGCAAC GGCGACGACT GGGGCGCAAT CGGCTTCAGC
TATGACGAGC AGCGCTTCAG CCCGCTGACC GACATCAACG ACCGGAATGT CGGCGATCTC
GGCATCGCCT GGTTCGCCGA CCTGGAGGAT GCACGCGGGC AGGAAGCGAC GCCGGTGGTG
GTCGACGGGG TGATGTATGT CAGCCATGCC TGGTCGAAGG TCAGCGCGTG GGACGCAGCG
ACCGGCAAGC CCTTGTGGAA ATATGACCCC AAAGTGCCGG GCGAGCGCGC GGTCCACGCC
TGCTGCGACG TCGTCAACCG CGGCGTTGCG GTGTGGGGCG ACAAAGTCTT TGTCGGCGCG
CTCGACGGGC GACTGATCGC CCTCGACCGG ACGAGCGGCA AGGAACTGTG GGCGACGCAG
ACCTTCGATG CCGACCGGCC CTATACGATC ACCGGCGCGC CGCGCGTGGT GAAGGACATG
GTGCTGATCG GCAATGGCGG CGCCGAGTTT GGCGTGCGCG GCTATGTGAC CGCCTATGAT
GCCGACACGG GCAGGCAGCG CTGGCGTTTC TACACCGCGC CCAACCCGAA GAAGGCTAAG
GACGGCGCGG CGTCGGACGC CATTTTCGCG TCGAAGGGCA ACGCCACCTG GTCCGACACG
GGCGAATGGC AGACGTCGGG TGGCGGCGGC ACGGTGTGGG ACGCGATCGT CTATGACAAG
GATCTCGACC AGATCTACCT CGGCGTCGGC AACGGCAATC CGTGGAACCA CGGCACGCGC
TCGAACGGCG AGGGCGACAA CTGGTTTCTC TCCTCGATCG TCGCGCTCGA CGCGACGACG
GGCGCCTATA AATGGCATTA TCAGGAAACC CCCGCCGAGA CGTGGGATTA TACCGCGACC
CAGCCGATCA TCCTCGCCGA GCAGGCGGTG AACGGAACGC CCACCAAGGT GCTGTACCAT
GCGCCCAAGA ACGGCTTCTT CTTCACCATC GACCGCGCGA CCGGCAAACT GCTCGACGCC
AAGCCCTTCG TCGACGGGAT CAACTGGGCG AGCGGCTACG ACCTTGCGAC CGGCCGCCCG
ATCGAGAATC CCGAGGCGCG CTTCTACAGG ACGGGCAAGC CCTTCATCGC GATCCCCGGC
GCATTGGGCG CGCACAACTG GCACCCGATG AGCTATAATC CCGCGACGGG GCTCGTCTAT
ATCCCGGCGC AGCAGATCCC GCAGGCCTAT GTCGCCGACA TGAACGAACT CGACCGGCGC
AAGGTCGTCG GCTTCAACGT CGGCACCTCG CTCACCGGCA CGATGCTGCC CGACGACAAG
GCGGCCTATC GCGCCGCGGT CGCGGCGACG ACCGGGCGCC TCGTCGCCTT CGACCCGCGC
ACGGGCAAGG TGGCGTGGGG GGTCGACCAT CCCGCGGCGT GGAACGGCGG AACGATGACC
ACCGCGGGCA ATCTCGTCTT CCAGGGCACG AGCACCGGGC GTTTCCGCGC CTATGCCGCC
GACACCGGCA AGCAGCTCCT CGACCTCGAC ATGCAGTCGG GGATCGTCGG CGCGCCCTCG
ACCTTCCGCG TGAACGGCGT CCAATATGTC GCTTTCCAGA CGAGCAAGGG CGGTGCCTTC
CCGCTCGTCG CCGGCGTCGC GGGCGGCGCG ACGCGCAAGG TTCCCAATAT CCCGCGCCTC
GTCGTATTGA AGCTCGGCGG CCGGGCGCAG CTTCCCGCGC TGCCGCGGGC AACGACGCTC
GCGTGGAACC CGCCGCCGCA GTTCGGCACA GCGGCACAGG TCGCCACAGG CAAGGCCTTG
TTCGGTCGCT ATTGCATCGT CTGCCACGGC GACAGCGCGA TCGGCAACGG CTTCACCCCC
GACCTGCGCG TCTCGGGCAC CCTTGCCAAC CCGGAGGCGT GGAAGGCCGT GCTCCTCGAC
GGCGCGCTCA AGGACCGCGG CATGGTCGGC TTCGCCAAGG TACTGACCCC GGCCGATGCC
GCGGCGATCC GCGCCTATGT CATCGATCGC TCAATCTGGA CCAGGGAAAA TCTGCCGAAC
GCATCGGCGC CGGTGGGGCG CTGA
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| Protein sequence | MAKRVFSAAL LGGAALALAA CNASKNEAIA AGSLDDAERA SEALLKTGGN GDDWGAIGFS
YDEQRFSPLT DINDRNVGDL GIAWFADLED ARGQEATPVV VDGVMYVSHA WSKVSAWDAA
TGKPLWKYDP KVPGERAVHA CCDVVNRGVA VWGDKVFVGA LDGRLIALDR TSGKELWATQ
TFDADRPYTI TGAPRVVKDM VLIGNGGAEF GVRGYVTAYD ADTGRQRWRF YTAPNPKKAK
DGAASDAIFA SKGNATWSDT GEWQTSGGGG TVWDAIVYDK DLDQIYLGVG NGNPWNHGTR
SNGEGDNWFL SSIVALDATT GAYKWHYQET PAETWDYTAT QPIILAEQAV NGTPTKVLYH
APKNGFFFTI DRATGKLLDA KPFVDGINWA SGYDLATGRP IENPEARFYR TGKPFIAIPG
ALGAHNWHPM SYNPATGLVY IPAQQIPQAY VADMNELDRR KVVGFNVGTS LTGTMLPDDK
AAYRAAVAAT TGRLVAFDPR TGKVAWGVDH PAAWNGGTMT TAGNLVFQGT STGRFRAYAA
DTGKQLLDLD MQSGIVGAPS TFRVNGVQYV AFQTSKGGAF PLVAGVAGGA TRKVPNIPRL
VVLKLGGRAQ LPALPRATTL AWNPPPQFGT AAQVATGKAL FGRYCIVCHG DSAIGNGFTP
DLRVSGTLAN PEAWKAVLLD GALKDRGMVG FAKVLTPADA AAIRAYVIDR SIWTRENLPN
ASAPVGR
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