Gene Sala_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0368 
Symbol 
ID4081240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp379182 
End bp380306 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content68% 
IMG OID638008727 
Productbeta-lactamase-like protein 
Protein accessionYP_615424 
Protein GI103485863 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.967784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.392052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG GCGACGAGGA AAATATCCCG GCGGCCAGCG GTTCGCCGGA CGCCTCGCTG 
ACCCAGGACG ACAGCTTTAC CGCGACGAGC CATGCGGGCC TCACCTATCC GTGGGGAGAG
GCCGCGCCCG GCGCGGGCGA GACGATCCGC ATCGCGGGCG GGATCAGCTG GGCGCGCATC
CCGATGCCGG GTTCGCTCGG CCATATCAAC AGTTGGCTGC TCGACGACGA TGACGGTGTG
GCGGTGGTCG ATACCGGCGT CTGCCTGACC ATGTGCTCTG ATGCCTGGAA GGCGCTCTAT
GCGGGCGCGC TCAAGGACCG GCGGATCACG CGCGTGATCG GCACGCACCT CCACCCCGAC
CATATCGGTC TCGCCGGCTG GATCGCGAAA AAGCAGGGTG TGAAGCTGTG GATGACGCGC
GGCGAAATGC TCACCGCACG CGCGATCGTC GCCGATTCGT CCGACAGCGC GCCCGAAGAG
GCGCTGGCGC AGTCGCGCGC CGCGGGCTGG GATGCGGAGG CGATCGAAGC GCAGCGCGGG
CGCGGCTGGA ACATGTTCCA GCGCATGATC TTCACCCTGC CGCGCTCCTA TGTGCGGATC
GCCGACGGCG ATGTCCTCGA CATGGGGGCG CATCGCTGGC GCGTCGTTGT GGGATCGGGG
CACAGCCCCG AACATGCGTG CCTGTGGAAC GAGGCCGAAG GCGTGCTCAT TTCGGGCGAC
CAGGTGCTGC CGCGGATCAG TTCGAACGTG TCGGTGAACA TCACCGAACC CGATGCCGAC
CCGCTGGGCG AATGGCTGGC GTCGATCGAC AAGCTGCTGC GCACCGTTCC CGCCGACGTC
ATCGTCTGCC CCGCGCATGG CGAGCCGTTC AGGGGGCTGC ACGTCCGGAT GACGGCGCTG
CGCGACGAGC ATCGGATGCG GCTGTACAAC CTCGCCGAAG CGGTCGCCAG GGCGCCGATG
CGCGCGGTCG ATGCCTTTCC GCTGCTCTTC AATCGCCCGA TCGGCGAGCA TAACCGCGGG
CTGGCAACGG GCGAAGCGCT CGCGCATCTG AAGCGGCTGG AGGTCGAGGG GCGGGTGAGG
CGCGAGGATC GCGACGGCGT GTGGTGGTAT CACGGGGTGG CGTGA
 
Protein sequence
MTIGDEENIP AASGSPDASL TQDDSFTATS HAGLTYPWGE AAPGAGETIR IAGGISWARI 
PMPGSLGHIN SWLLDDDDGV AVVDTGVCLT MCSDAWKALY AGALKDRRIT RVIGTHLHPD
HIGLAGWIAK KQGVKLWMTR GEMLTARAIV ADSSDSAPEE ALAQSRAAGW DAEAIEAQRG
RGWNMFQRMI FTLPRSYVRI ADGDVLDMGA HRWRVVVGSG HSPEHACLWN EAEGVLISGD
QVLPRISSNV SVNITEPDAD PLGEWLASID KLLRTVPADV IVCPAHGEPF RGLHVRMTAL
RDEHRMRLYN LAEAVARAPM RAVDAFPLLF NRPIGEHNRG LATGEALAHL KRLEVEGRVR
REDRDGVWWY HGVA