| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0367 |
|---|
| Symbol | |
|---|
| ID | 4081239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 378392 |
|---|
| End bp | 379054 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638008726 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615423 |
|---|
| Protein GI | 103485862 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3820] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.362236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATG CCAATCCGAC CCCGCTGATG CCGCATGCGA CCGCCGCCTG GCTGGTCGAC
AACACCGGCC TGACTTTTGG CCAGATCGCC GAATTTTGCG GCATCCACAT CCTCGAGGTG
CAGGCGATCG CCGACGAGAC GGCGGCGACC AAATATACCG GCCGCGACCC GGTGCGCGCG
CACGAGTTGT CGATGGAGGA AATCGAAAAG GGGCAGAAGG ACCCCAATTA CAAGCTCAAG
ATGACCGTGC AGGCGCAGGA CGTGATTCGC CGCACCCGCG GGCCGCGCTA CACCCCGGTC
AGCAAGCGGC AGGACAAGCC CGACGGCATC GCATGGATCC TGAAGAACCA CCCCGAAGTG
TCCGACGGCG CGATCAGCAA GCTGATTGGC ACGACGCGCA ACACGATCGG CGCGATCCGC
GACCGCAGCC ACTGGAACAG CGCGAACATC GTCCCGAAAG ACCCGGTGAC GCTGGGCCTC
TGTTCGCAGC GCGAACTCGA CGCGCTGGTC GCCAAGGCGG CGAAGAAGGC GGGGATCAAG
GCGCCCGAGG ACAGCCGGTT GGAGGGCGAC CGCGAGGCGC TGCTCGAAGA ACTGCGCGCC
GAACGCACCG CGGCAAACGA AGCGCGCGCG GCCGAAGAGG CACAGGCCGA CGGCGAAGAC
TGA
|
|---|
| Protein sequence | MANANPTPLM PHATAAWLVD NTGLTFGQIA EFCGIHILEV QAIADETAAT KYTGRDPVRA
HELSMEEIEK GQKDPNYKLK MTVQAQDVIR RTRGPRYTPV SKRQDKPDGI AWILKNHPEV
SDGAISKLIG TTRNTIGAIR DRSHWNSANI VPKDPVTLGL CSQRELDALV AKAAKKAGIK
APEDSRLEGD REALLEELRA ERTAANEARA AEEAQADGED
|
|---|
| |