| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0362 |
|---|
| Symbol | |
|---|
| ID | 4081234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 374608 |
|---|
| End bp | 375207 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638008721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615418 |
|---|
| Protein GI | 103485857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.408441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG GATTGTTCCG CGTCGCGGTC GTCGCGGTGC TCGCGCTCGC ACTCTTCTTC
GGTTGGCGCG CGTGGAGCGA CTGGCAGCGC GGCTATGATC CCCAGACCGT CGTTGCCGCG
AGCCTTGAGG GGCTGAAGGA GCAGAATGTT CTGGTCCCCT TCACCGCGCG TTACGTCGCG
GTGGTGACCT CGACGCAGAG TCGGCTGGGG CTGAGCGCCA AAAAGACGCT GATCATGCCG
GGGACGGTGC GTTACGAACT CGATCTTGGC CGTCTGAAAC AGTCGGATCT CGATTGGGAC
GGCGCGACCA ATGCGCTGAC GGTCACGCTG CCGCCGCTGC GGCTCGCGGG CCCCGAAATC
GACATCGACG CGATCAGCGA GTTTCGCGAC GGCGAAATCC TGCTGACCCT GACCGATGCC
GAAGCGTCGC TCGACGCGGC GAATCGCAAG GCGGCGCAAG AGGAACTCAT CAGGCAGGCG
CGCGGCGCGA CGCCGATGCG CCTCGCCGAA GGCGCTGCAC GCGCCGCGAT CGAGCAAAGC
TTTGCGATGC CGTTGAAGGC CGTCGGCATC GACGCCACGG TGACTGCGCG TTTCGAGTAA
|
|---|
| Protein sequence | MNRGLFRVAV VAVLALALFF GWRAWSDWQR GYDPQTVVAA SLEGLKEQNV LVPFTARYVA
VVTSTQSRLG LSAKKTLIMP GTVRYELDLG RLKQSDLDWD GATNALTVTL PPLRLAGPEI
DIDAISEFRD GEILLTLTDA EASLDAANRK AAQEELIRQA RGATPMRLAE GAARAAIEQS
FAMPLKAVGI DATVTARFE
|
|---|
| |