| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0351 |
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| Symbol | |
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| ID | 4081049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 361358 |
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| End bp | 363181 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638008710 |
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| Product | hemolysin activation/secretion protein-like protein |
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| Protein accession | YP_615407 |
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| Protein GI | 103485846 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.410508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.212759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGT CGGGGGATGA GGGACAGGAT CCGATTTTCG GGCTGCGACG CGGGGCGTTC
CGCGCCGCGC TGACCGCGTC GACGGGGCTG ATCGCGGCCG CGCTGCCCGC CGCGGCGCTT
GGGCAGGCCA CGCCGCAGAT CCCCACGCGC GAGGAAATCC AGCGCCCGCC GCTCGCGCCC
GCGGCACCGC CCGGCGAGCG GATCGTGGCG GTCGACGAGG AGATCGAGCG CGCGCCCTGT
CCGCTGGCCG ACCCGCAATT TGCCCATATC CGCTTCACCC TTCGCGCGGT CGAGTTTTCG
CGTGTCGAGG GCATCGACCC GGCGATGCTG TCGCCAAGCT GGTCGGGCCG CACCGGGCAG
GAGCTGCCGA TCGCCGCGGT GTGCGACATC CGCGACCGCG CCGCGACCAT GCTGCGCGCC
AAAGGCTATC TGGCCGCCGT GCGCGTCCCT GCGCAGACGA TCGACGACGG GGTCGTGCGG
CTCGACATAT TGGCGGCGCG GATGGCGCGC GTCGAAGTGC GCGGCGATGC CGGCGCCAAC
GAGGCGCTGC TTCAGCGCTA CCTGTCGCGA CTCGACGACG CGCCGGTGTT CAACATCGCC
GATGCCGAGC GCTACCTGCT GCTCGCGCGC GACATTCCGG GGATGGATGC GCGGCTGACG
CTGCGCCCCG GCGGCACGCC GGGCGAAGTC ATCGGCGAAG TGACGGTGGT GCGCACCCCC
GTCACCTTCG ACTTCAACGC CCAGAATCTC GGTTCGCGCG ATGTCGGCCG CTGGGGCGCC
AATGCGCGCG CGCGCTTCGC CGGGCTGACC GGCATGGCCG ATCTCACGAC GCTGAGTTTC
TATTCGACCC CAGATTTCGA CGAGCAGACG GTCGTGCAGG TCGGCCACGA GCTGCGCGTC
GGCGGCGAGG GATTGCGGCT CGGCGCCAGC TATATCTATG CCTGGACGCG CCCCGACGTC
ACCGGACTGC CGATCAAGTC CGATACGCAG ATCCTTAGCC TGTTCGCCTC CTATCCGCTC
GTGCTGACAC AGGCACGGCG GCTGACGATC GGCGGCGGGC TCGACATTAT CGACCAGGAC
ATCGGCCTGT CGGGCATATC GCTCAACGAG GACCGGCTGC GCGTTTTGGG CCTGCGCGCC
GATGCGAGCT GGGTCGACCC CGGTTCGATC GCCGGGCGCG GCGGCTATAG CGCGGGCGAG
CCGCGCTGGT CGCTCGCCAC CTCGCTCGAA GCGCGGCAGG GTGTGGATTT CCTGGGCGCG
AGCGACGATT GCGGGCCCGG CGGCACCGCC TGTTTCCTGC CCGGCGCGGT ACCGCTGACG
CGCATCGAGG GGCAGCCCGA CGCCTTCCTC ATCCGCGCGC AGGCGCTCGC CGAATGGCGC
CCCGTCAAGC TGTTCACCCT GTCGGCGGCC CCGCGCGCCC AATGGGCAGC CGATCCCCTG
CTCGCCTATG AAGAGTTTTC GGGGGGCAAT TTTACCGTCG GGCGCGGGTT CGACCCCGGC
ACGGTGATCG GCGACAGCGG CGTCGCCGTG GCGCTGGAGG CGCGTTATGG CTCGTTCGTC
CCCGCCAATA CCAAGGCTTT CGCGATCCAG CCCTTCGCTT TCTTCGACGC GGCCTGGGTG
TGGAACGAAG ATGCGGCGTT CGACGGGCTC GATCCGCAAA AGCTTTATTC GGCGGGCGGC
GGCGTGCGTG TCGCCTATGG CGATGTCGCG CGGCTCGACG TGACGCTCGC GGTGCCGCTC
AATCGGGGCG GTTTCCTGAC CGAACGGCCC GACCCGCGGT TGCTCGTGTC GCTTACCACC
CAGTTCGGCG TCAGGGCGCG CTGA
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| Protein sequence | MAVSGDEGQD PIFGLRRGAF RAALTASTGL IAAALPAAAL GQATPQIPTR EEIQRPPLAP
AAPPGERIVA VDEEIERAPC PLADPQFAHI RFTLRAVEFS RVEGIDPAML SPSWSGRTGQ
ELPIAAVCDI RDRAATMLRA KGYLAAVRVP AQTIDDGVVR LDILAARMAR VEVRGDAGAN
EALLQRYLSR LDDAPVFNIA DAERYLLLAR DIPGMDARLT LRPGGTPGEV IGEVTVVRTP
VTFDFNAQNL GSRDVGRWGA NARARFAGLT GMADLTTLSF YSTPDFDEQT VVQVGHELRV
GGEGLRLGAS YIYAWTRPDV TGLPIKSDTQ ILSLFASYPL VLTQARRLTI GGGLDIIDQD
IGLSGISLNE DRLRVLGLRA DASWVDPGSI AGRGGYSAGE PRWSLATSLE ARQGVDFLGA
SDDCGPGGTA CFLPGAVPLT RIEGQPDAFL IRAQALAEWR PVKLFTLSAA PRAQWAADPL
LAYEEFSGGN FTVGRGFDPG TVIGDSGVAV ALEARYGSFV PANTKAFAIQ PFAFFDAAWV
WNEDAAFDGL DPQKLYSAGG GVRVAYGDVA RLDVTLAVPL NRGGFLTERP DPRLLVSLTT
QFGVRAR
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