| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0347 |
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| Symbol | |
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| ID | 4081045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 352006 |
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| End bp | 352950 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008706 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_615403 |
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| Protein GI | 103485842 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.335863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA CCGTCACCGT CCTGTCGGGC CTCATCCGCC CCCTCGTCGA AAGCCGCCTC
CCCGAATGGG TCGAGCCGCG CTTTTTTCAG TCAAAGGACG AGGCCCTCGA ACTCGCGCCG
CACGCCGAAA TCGGCTGGTT CGACATGTAT GACAAGAAGG ACATGGCCGC GGTCATCACC
GCGGCGACCA AGCTCAAATG GCTGAACTCG ATCTACGCCG GCGTCGACGG CATGCCGCTC
GATCTGCTCG CGACACGCGG CACCATCGTC ACCAACGGCG CGGGGATCAA CGCGATCACC
ATCGCCGAAT ATGTCGTGAT GGGGATGCTC ACCGTCGCCA AGGGTTACCG TGAGGTCGTG
CGCGCGCAGG AGCGGCGCGA GTGGCTGACG GACTCGCCGG GCAAGGTTGA ACTGTTCGGA
TCGAAGGCGC TGCTCCTCGG CTATGGCGCG ATCGGCAAGC TGATCGAGGA GCGGCTGAAG
GGTTTTGCGG TCGAGGTCAC CGTCGTCCGC CGCACGCCGG GCGAACATAC GCTGACCCCC
GACCAGTGGC GCGCGCGGCT TGGCGATTTC GACTGGGTGA TCCTGGCGGT CCCGGCGACC
CCCGAAACCG ATGGCATGAT CGGCGCCGCC GAACTCGCCA CGATGAAGCC GAGCGCGACG
CTCATCAACA TCGCGCGCGG CAGCGTCGTC GATCAGGACG CGCTCGTCGC CGCGCTCGAT
GCGCAGCAGA TCGCCGCGGC CTTCCTCGAC GTCACGACGC CCGAACCGCT TCCCGCCGAC
AATCCGCTGT GGAGCCTCGA CAATGCGCAT ATCACCATGC ATCTGTCGGG CCGCGCGCAG
GACAAGATGT TCGTGCGCTC GGCAGAGCGG TTTCTGGAGA ATCTGGCGCG GTGGCACCGG
GGCGAGGCGG TCGAGCCACG GGTGAACCTC ACTTTAGGCT ACTGA
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| Protein sequence | MTKTVTVLSG LIRPLVESRL PEWVEPRFFQ SKDEALELAP HAEIGWFDMY DKKDMAAVIT
AATKLKWLNS IYAGVDGMPL DLLATRGTIV TNGAGINAIT IAEYVVMGML TVAKGYREVV
RAQERREWLT DSPGKVELFG SKALLLGYGA IGKLIEERLK GFAVEVTVVR RTPGEHTLTP
DQWRARLGDF DWVILAVPAT PETDGMIGAA ELATMKPSAT LINIARGSVV DQDALVAALD
AQQIAAAFLD VTTPEPLPAD NPLWSLDNAH ITMHLSGRAQ DKMFVRSAER FLENLARWHR
GEAVEPRVNL TLGY
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