Gene Sala_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0345 
Symbol 
ID4081043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp349119 
End bp351053 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content67% 
IMG OID638008704 
Producthypothetical protein 
Protein accessionYP_615401 
Protein GI103485840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA TCCTGCGCCG CATCGCGACG ACCAAGACGG GCAAGCAGAT CGTCCGCGAT 
CAGCCGCTGC CGGGCGACAC GATCACGCTG GGTCGCGACA GCGCGAACGG GATTCACGTC
GCCGATCTGG CGGTAAATCC GCACCATGCG ACGATCGCCA GCAGCGATGG GCGCACGGTG
CGGGTGACGG CGCAGGAGGG GCTGGGGTTC GACCTCAACG GCCGCACCGA AACCGTCGCC
GACATCGACA GCGCGGCGGG GGGTGAGCTT CGCTTCGGCG GCCACCGGCT GACGATCGCG
CGCGAGGACG GCAGGATCAT CCTCCTCGTC GAGCGCATCG ACGAATTGTC GCAATCGTCG
AAGGATGTCG ACGAGGTAAA GGCCTTTTCG CTCGCGGGCG TGATGCCGGG CAAGCGGGTC
GGGGCGTGGA CCTTTGGCCT GCTGATGCTG CTGGCGTTCC TCGTGGGGCC GATCTGGGCA
TGGCACAGCT ATCGCCAGGT CGACGAGCGG CCCGACGGCT TCCACGCCGA CCGTACCTGG
CTGTCGGGTC CGCTGTCGAG CGCGCACGCC AATCTGACCA AGGATTGCCA GTCGTGCCAC
GTCGAGCCGT TCGTCGCGGT GACCGACAGT GCGTGCGTGA ACTGTCACAC GGGTGAGCAC
AAGGCGATGA GCATGGCGCA CGCCGGTGCG CCGACCGCGA TGCTGCTCGC GGCGCGCGCC
CCGCCGGGCG GGTTCGACAA GTTCCTCGCC AATGTCGGCG AGGCATTCAA CCGGCCGCAG
GGACGCTGCG TCGATTGCCA TACCGAGCAT GAGGGCGCCG GGCCGATGGC GGCGACGCCG
CAGCAATTCT GCGCCGATTG CCACGACGGG ATGCAGGGCC GGCTCAAAAG TGCGGGGCAT
CCGACGATGC TGGCCGATGC CAGCGATTTC GGCACGGGCC ACCCCGAGTT CCGCCCACTC
GTCCGCGCCG TGCCGGGCGG TAAACTGGAG CGTATGATGC TGGCGAAGGG CGTCGTCGAC
GACAACGGCC TGAAGTTCCC GCACGACCTG CACCTGCGGG CGAATGGCGG GGTCGCGCGT
ATGGCGGCGA GTTTTCGGGG CCGTCATGAT TTCGGGCGGA AGCTGGAATG CGAGAATTGC
CACCGGGTCG AGGCCGATGG TGTGCGCGTC AAGCCCGTCG AGATGGAGCG CGACTGCGCG
ATGTGTCACA GCCTGGCGTT CGAGACCGTC GGCGGGGTGA CGCGGACGCT GCGCCACGGC
GAGCCGACGC AGGTCATCGC CGACCTGACC GCCTATTACC GCTCGACCCC GCCGTCGCGA
CCGCTTCAAC TGGGCGGAAT GCAGCGGCGG CGGCCGGGAG CCTATGCCGA GGGGCAGGTT
TACAACATCT ATTTCAACGA GGTGGCGGTG CGGCCGGCCC GCGCGCAGGA TGCCGTGCGC
GCAATCTTTT CCAAGGGCGG CGCCTGTTAC GACTGCCACA CCATCTTCGC CCCACGGGCG
GGCAGCAGCT GGCGCGTCGC GGCGGTGAAC CAGACGCAGC GTTACCTGCA AAAGGGCTGG
TTCGACCATG ACGCGCACAA GGAAACCGCG TGCGCCGATT GCCATACCGC AGCGCCCGCG
TCGAAAGCGT CGACCGACCT GCTCGTGCCG GGCCTTCGCC AGTGCCGCGA CTGTCATGTC
GGCGAAGGTG GGGCGCGGCT GGTGAAGGTC GAAACCGCGA CCGAATCGCC CTGCGCCATG
TGCCATGAAT ATCATTCGGA CGGCGGCAAA CCGTGGGCGC CGAAGCGTCA GCAGAGAGTT
AACAGCGTGG CAATCACAAA TAAACGCGCC GGTGCCAGTG TGAGTGTGAC CGCGATCACA
GGTGCCGCCG CGCGTGGTCT TTATCATGTG ACGTGGCGCA CACCGGCCTT GCACGGGGCA
AGGCGGGGCG GGTGA
 
Protein sequence
MSFILRRIAT TKTGKQIVRD QPLPGDTITL GRDSANGIHV ADLAVNPHHA TIASSDGRTV 
RVTAQEGLGF DLNGRTETVA DIDSAAGGEL RFGGHRLTIA REDGRIILLV ERIDELSQSS
KDVDEVKAFS LAGVMPGKRV GAWTFGLLML LAFLVGPIWA WHSYRQVDER PDGFHADRTW
LSGPLSSAHA NLTKDCQSCH VEPFVAVTDS ACVNCHTGEH KAMSMAHAGA PTAMLLAARA
PPGGFDKFLA NVGEAFNRPQ GRCVDCHTEH EGAGPMAATP QQFCADCHDG MQGRLKSAGH
PTMLADASDF GTGHPEFRPL VRAVPGGKLE RMMLAKGVVD DNGLKFPHDL HLRANGGVAR
MAASFRGRHD FGRKLECENC HRVEADGVRV KPVEMERDCA MCHSLAFETV GGVTRTLRHG
EPTQVIADLT AYYRSTPPSR PLQLGGMQRR RPGAYAEGQV YNIYFNEVAV RPARAQDAVR
AIFSKGGACY DCHTIFAPRA GSSWRVAAVN QTQRYLQKGW FDHDAHKETA CADCHTAAPA
SKASTDLLVP GLRQCRDCHV GEGGARLVKV ETATESPCAM CHEYHSDGGK PWAPKRQQRV
NSVAITNKRA GASVSVTAIT GAAARGLYHV TWRTPALHGA RRGG