| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0342 |
|---|
| Symbol | |
|---|
| ID | 4081040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 344728 |
|---|
| End bp | 345501 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638008701 |
|---|
| Product | arginyl-tRNA-protein transferase |
|---|
| Protein accession | YP_615398 |
|---|
| Protein GI | 103485837 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2935] Putative arginyl-tRNA:protein arginylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.287506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGCAC CGTTCCGTTT TCCGCGCTTT TTCGTCACCA GCCCGGCGCC GTGCCCCTAT
CTGGCGGGCA GGACCGAACG CAAGGTTTTC ACTGAGCTCA GCGGAAACAA TGCAACCGAA
CTCAACGACG CGCTGGGCCG GATCGGCTTT CGCCGCAGCC AGTCGGTCGC CTATCGCCCG
AGCTGCGCCG ATTGTTCGGC GTGCGTTTCG GTGCGCGTCT GCGCGAGCGA GTTTGCGCCG
AGCAACTCAC AGAAGCGCAC GCTGCGCCGC AACGGCGATC TGGTCGTCAC GGCGTGCAAG
CCGTGGGCCA CCGAAGAGCA ATATGCGCTG CTGCGCTCCT ATCTCGCCTC GCGCCACCCC
GACGGCGGCA TGGCCGACAT GGACGAGCAG GATTTTGCCG ACATGGTCGA ACAGACCCCG
GTGGACAGCT ATATGATCGA ATATCGCGAG CCGGTGGCGG GCGGCGGCAA GGGGCGGCTT
GTCGGCTGTT GCCTGACCGA CCGGCAGGGC GACGGGCTGT CGATGATCTA CAGCTTTTTC
GATGCGCATC ATCCGCTGCG CGAGGGGCTG GGCACCTACA TCATCGCCGA CCATGTGTTG
CGCGCCGCCA AGGCGGGGCT GCCCTATGTC TACCTGGGCT ACTGGATCGA GGGATCGGCG
CGCATGGCGT ACAAGGCACG CTTCCGCCCG CTCGAAAAGC TCGGCCCCGA TGGCTGGTCA
CGCTTCGAGC CGACGCCGTC GGAGCGGATC GCGGCGATGT TCGAACTGGC TTGA
|
|---|
| Protein sequence | MSAPFRFPRF FVTSPAPCPY LAGRTERKVF TELSGNNATE LNDALGRIGF RRSQSVAYRP
SCADCSACVS VRVCASEFAP SNSQKRTLRR NGDLVVTACK PWATEEQYAL LRSYLASRHP
DGGMADMDEQ DFADMVEQTP VDSYMIEYRE PVAGGGKGRL VGCCLTDRQG DGLSMIYSFF
DAHHPLREGL GTYIIADHVL RAAKAGLPYV YLGYWIEGSA RMAYKARFRP LEKLGPDGWS
RFEPTPSERI AAMFELA
|
|---|
| |