| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0341 |
|---|
| Symbol | |
|---|
| ID | 4081039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 343046 |
|---|
| End bp | 344500 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638008700 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_615397 |
|---|
| Protein GI | 103485836 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0955496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCAGA GCTTTACCCC CCGCCAGCGC AAGGTGCGTA TCCTGGCGAC GCTTGGCCCC
GCGAGCGCCA ATGCCGAGAT GATCGCCGCG CTGCACCGTG CGGGCGCCGA CGCCTTTCGC
GTCAATATGA GCCATGGCGA CCATGCGGGT CATGCAAAGG TGATTGCGGC GATCCGGTCG
CTTGAGAAGG AAACGGGGCG CCCGACGACG ATCCTCGTCG ACCTGCAGGG GCCAAAGCTG
CGCGTCGGGA CGTTCAGGGA TGGCCCCGCC GAGCTGGTCA AGGGTGCAGC GTTCATGCTC
GATACCGACA CGGCTCCCGG CGACGCGACG CGCGTGCATC TGCCGCACCC CGAGCTGTTC
GCGGCGCTCG AACCCGATAC ACGGCTGCTC ATTGACGACG GCAAGCTGGT GTTGCGCGTG
AAGAGCGTGT CGGCCGAGCG GATCGAAACG ATTGTCGAGG TCGGGGGCAA GATTTCGGAT
CGCAAGGGGG TCAATGTCCC CGACGTCGTC GTGCCGCTGG CGGCGCTCAC CGAAAAGGAT
CGCAAGGATC TCGCCTTCGC GCTCGAACAG CATGTCGACT GGATCGCGCT GTCCTTCGTG
CAGCGACCCG AAGATGTCGC CGAAGCGCGG CGGCTGATCG GCGGCAAGGC GGCGCTGCTC
GTCAAGTTCG AGAAGCCGTC GGGGGTGCAG CGGATCGACG AGATTTTGGA ACTTGCCGAC
GCGGCGATGG TCGCGCGCGG CGATCTGGGG GTCGAACTTC CTCCCGAAGC CGTGCCGCCG
CTTCAGAAAC GCATCGTCGC GACCGCGCGG CGGATGGGCA AGCCGGTGGT GGTCGCGACG
CAGATGCTCG AATCGATGAT CGTCTCGCCC TCGCCGACGC GCGCGGAAGT CAGCGATGTC
GCGACCGCGG TTTATGACGG CGCCGACGCG ATCATGCTGT CGGCCGAGAC CGCCGCGGGC
GCGTGGCCGG TCGAAGCCGT CACCATGATG GATTCGATTG CGCGCTCGGT CGAAGGCGAT
CCCGATTATT TCCGCCGTCT CCACTTCACC GAGACACAGC CCGACGCGAC AACCGCCGAC
GCGCTGGCCG AGGCGGCGGG CAGCATCATC ACGACGATCG CCGCCGATGC GATCATCTGT
TTCACTGCAT CGGGATCGAC CGCGCGCCGC GTCGCGCGCG AGCGGCCGGG CGCCCCCTTG
CTCGTGCTGA CGCCGAGGAA GGAAGCAGCG CGGCGCATGG GGCTGCTGTG GGGCGCGCAT
GCCGTGCCGA CCAGGGACAT CGGCAGTTTC GAGGAGATGA TCGCCAAGGG CAAGCGCATG
GCGCTGCGCC ACGGGATCGG CAAGGCGGGA TCGAAGCTGG TGATGATGGC GGGGGTGCCA
TTCGGCACGC CGGGATCGAC CAATGTGCTC CACGTCGCGA CGCTGACCGG CGACGAGCTG
CGTGGGTATA GCTGA
|
|---|
| Protein sequence | MVQSFTPRQR KVRILATLGP ASANAEMIAA LHRAGADAFR VNMSHGDHAG HAKVIAAIRS
LEKETGRPTT ILVDLQGPKL RVGTFRDGPA ELVKGAAFML DTDTAPGDAT RVHLPHPELF
AALEPDTRLL IDDGKLVLRV KSVSAERIET IVEVGGKISD RKGVNVPDVV VPLAALTEKD
RKDLAFALEQ HVDWIALSFV QRPEDVAEAR RLIGGKAALL VKFEKPSGVQ RIDEILELAD
AAMVARGDLG VELPPEAVPP LQKRIVATAR RMGKPVVVAT QMLESMIVSP SPTRAEVSDV
ATAVYDGADA IMLSAETAAG AWPVEAVTMM DSIARSVEGD PDYFRRLHFT ETQPDATTAD
ALAEAAGSII TTIAADAIIC FTASGSTARR VARERPGAPL LVLTPRKEAA RRMGLLWGAH
AVPTRDIGSF EEMIAKGKRM ALRHGIGKAG SKLVMMAGVP FGTPGSTNVL HVATLTGDEL
RGYS
|
|---|
| |