| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0333 |
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| Symbol | ruvB |
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| ID | 4081031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 337887 |
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| End bp | 338903 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638008692 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_615389 |
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| Protein GI | 103485828 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.693851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACC TCACCACCCC CATCCGCACC CCCGAAGACG CCGACGCCGC GCTGCGCCCG
AAAACGCTGG CCGAGTTCGT CGGCCAGGCG GCGGCGCGCG AGAATCTGCG TATCTTTATC
GAGGCGGCGA AGGCGCGCGG CGACGCGCTC GACCATGTGC TCTTCTTTGG CCCGCCGGGG
CTGGGCAAGA CGACGCTGGC GCAGATCGTC GCGCGTGAAC TTGGCGTCGG CTTCCGCTCG
ACCAGCGGGC CGGTGATCGC CAAGGCGGGC GACCTTGCCG CGCTGCTCAC CAATCTAGAG
GACGGCGATG TCCTGTTCAT CGACGAAATC CACCGCCTGT CGCCCGCGGT CGAGGAAATC
CTCTATCCCG CGATGGAGGA CCGCGCGCTC GACATCATGA TCGGCGAGGG GCCGTCGGCG
CGTTCGGTCC GCATCGACCT CCCCCAATTC ACCCTCGTCG GCGCGACTAC GCGGCAAGGC
CTGCTGACGA CGCCGCTGCG CGATCGCTTC GGCATTCCGG TGCGGCTCAA TTTCTATACG
CACGCCGAGC TGGAGCAGGT GATCGGCCGC GCGGCGCGGT TGCTTGGTCT TGCCATCGCG
CCCGACGGCG CGCTGGAAAT CGCCAAGCGT TCGCGCGGGA CGCCGCGCAT CGCGGGACGG
CTGCTGCGCC GCGTGCGCGA TTTCGCGGCC GTGGCGGGGC ACGCCATCGT CGATGCACGC
GCCGCCGATG CCGCGCTCAA CCGGCTGGAG GTCGATGCGC TGGGCCTCGA TGCGATGGAC
CGGCGCTATC TGACGATGAT CGCCGACATC TATCGCGGCG GTCCGGTCGG GGTGGAAACG
CTCGCCGCAG GCCTTTCGGA GCCGCGCGAC ACGATCGAGG ATGTGATCGA GCCCTATTTG
CTGCAAATCG GGCTGATCGC CCGCACCGCG CGCGGGCGGA CGCTCAACGC CAGCGCGTGG
AAACATCTGG GGCTCAATCC ACCCGCCGGG TCGCAGGACG GGCTGTTCGA CAAATGA
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| Protein sequence | MTDLTTPIRT PEDADAALRP KTLAEFVGQA AARENLRIFI EAAKARGDAL DHVLFFGPPG
LGKTTLAQIV ARELGVGFRS TSGPVIAKAG DLAALLTNLE DGDVLFIDEI HRLSPAVEEI
LYPAMEDRAL DIMIGEGPSA RSVRIDLPQF TLVGATTRQG LLTTPLRDRF GIPVRLNFYT
HAELEQVIGR AARLLGLAIA PDGALEIAKR SRGTPRIAGR LLRRVRDFAA VAGHAIVDAR
AADAALNRLE VDALGLDAMD RRYLTMIADI YRGGPVGVET LAAGLSEPRD TIEDVIEPYL
LQIGLIARTA RGRTLNASAW KHLGLNPPAG SQDGLFDK
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