Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0327 |
Symbol | |
ID | 4082358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 333192 |
End bp | 333704 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008686 |
Product | OmpA/MotB |
Protein accession | YP_615383 |
Protein GI | 103485822 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.927231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATAC GCAAAAGCAC CGCGATGATC GCGGCGATCA CCATGCTTGC TGTTGGCGCC TGCGCGAAAA AGGCCCCGGA CACGCTGCCC CCCGCGCCCG AAGGCGCCGG GACCGACACG ACAACCGACA CCGGCACCGG CGTCGTTCCG GGATCGCAGG AAGATTTCGT CGCCAATGTG GCATCGGACC GCATCTTCTT CGACTTCGAC CAGTATAATG TCGATGCGCA GGATCAGGCG ACGCTGCAAA GCCAGGCCCA GTGGCTGCAA CGCAATCCCG CGGTCCGGGT CACGCTGGAA GGCCACGCCG ACGAACGCGG CACGCGCGAC TATAATATCG CCCTCGGTGA ACGCCGCGCC AACGCCGCGA AAAACTACCT CGCCTCGCTC GGCATCGATC CGTCGCGGAT CAATGTCATC AGCTATGGCA AGGAACGCCC CGCCGCGATC GGCTCGAACG AGGAAGCCTG GGCGCAGAAC CGCCGCGCAG TGACCGTCGT CATCGGGCGA TAA
|
Protein sequence | MTIRKSTAMI AAITMLAVGA CAKKAPDTLP PAPEGAGTDT TTDTGTGVVP GSQEDFVANV ASDRIFFDFD QYNVDAQDQA TLQSQAQWLQ RNPAVRVTLE GHADERGTRD YNIALGERRA NAAKNYLASL GIDPSRINVI SYGKERPAAI GSNEEAWAQN RRAVTVVIGR
|
| |