Gene Sala_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0327 
Symbol 
ID4082358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp333192 
End bp333704 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID638008686 
ProductOmpA/MotB 
Protein accessionYP_615383 
Protein GI103485822 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.927231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAC GCAAAAGCAC CGCGATGATC GCGGCGATCA CCATGCTTGC TGTTGGCGCC 
TGCGCGAAAA AGGCCCCGGA CACGCTGCCC CCCGCGCCCG AAGGCGCCGG GACCGACACG
ACAACCGACA CCGGCACCGG CGTCGTTCCG GGATCGCAGG AAGATTTCGT CGCCAATGTG
GCATCGGACC GCATCTTCTT CGACTTCGAC CAGTATAATG TCGATGCGCA GGATCAGGCG
ACGCTGCAAA GCCAGGCCCA GTGGCTGCAA CGCAATCCCG CGGTCCGGGT CACGCTGGAA
GGCCACGCCG ACGAACGCGG CACGCGCGAC TATAATATCG CCCTCGGTGA ACGCCGCGCC
AACGCCGCGA AAAACTACCT CGCCTCGCTC GGCATCGATC CGTCGCGGAT CAATGTCATC
AGCTATGGCA AGGAACGCCC CGCCGCGATC GGCTCGAACG AGGAAGCCTG GGCGCAGAAC
CGCCGCGCAG TGACCGTCGT CATCGGGCGA TAA
 
Protein sequence
MTIRKSTAMI AAITMLAVGA CAKKAPDTLP PAPEGAGTDT TTDTGTGVVP GSQEDFVANV 
ASDRIFFDFD QYNVDAQDQA TLQSQAQWLQ RNPAVRVTLE GHADERGTRD YNIALGERRA
NAAKNYLASL GIDPSRINVI SYGKERPAAI GSNEEAWAQN RRAVTVVIGR