| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0321 |
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| Symbol | |
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| ID | 4082352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 328358 |
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| End bp | 328969 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638008680 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_615377 |
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| Protein GI | 103485816 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC AGCGCGGCTT CACCCTGGTC GAGATGCTCG TCGCGCTGTC GCTGTTCGCG
GCGATTGCGG CGATCGGGGT CGGCCTGCTG CGCAGCAGCA TCGACACGCA GGACGCGGTG
CAGGAACGGC TGAAGGGCAT GAGCGGGATG AACCGCGTGC GCGCGATCAT GGCGAATGAT
CTGGCGCAGG CGGTGCAGCG GCCGACGCGC GGTGCGGCGG GGGAGGCGGT GCCAGCGTTC
GTCGGATCCA GCAATGGCTT TGCCTTTGTC CACGCCGGTG CGGCGGCGTT TGACGGCAGC
CCGCGCCCCG CGGTCGCGCG CGTCGGCTAT GCGCGCGTCG GCAGCGAATG GCGGCGCGCG
ACGCAGCCGA TGCTCGACGG CACCGCGCTG GGCGAGGGCG ACCGGTTGCT GGACGCGGTG
ACGGCGGCGC GGGTGCGCTA TCGCGACGAG GCTGGGCGCT GGAGCGAGAG CTGGACGTCG
GAGCCGGGCG ACCGCCTGCC GCGCGCGGTC GAGGTGCGGA TCGACCGAAC GGGCCGCCCG
CCGCTGACGA TGCTGTTCCT CACCGCGCCG ACGCCATTGC CGCCGCCCGC CATCGCGGGA
GAGGCGCCAT GA
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| Protein sequence | MTDQRGFTLV EMLVALSLFA AIAAIGVGLL RSSIDTQDAV QERLKGMSGM NRVRAIMAND
LAQAVQRPTR GAAGEAVPAF VGSSNGFAFV HAGAAAFDGS PRPAVARVGY ARVGSEWRRA
TQPMLDGTAL GEGDRLLDAV TAARVRYRDE AGRWSESWTS EPGDRLPRAV EVRIDRTGRP
PLTMLFLTAP TPLPPPAIAG EAP
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