| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0319 |
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| Symbol | |
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| ID | 4082350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 327506 |
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| End bp | 327994 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638008678 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_615375 |
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| Protein GI | 103485814 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATAT TCGCGGCGAC AGCTAAACTC CGCGCGCGCG CGCGTCCCGA CGCCAACGGA
TTCACGCTGG TCGAACTGAT GGTCGTGCTG GCGATTATGG CGCTCGCGGC GACCGCGGTG
GTGCTGACGA TCCCCGGCGA GGAACGCAGC GTGCGCAGCG AGGCCGACCG GCTCGCCGCG
CGCCTCGCCG CCGCGCGCGA CGTCGCGGTG ATCGAGGGGC GCAGCGTCGC CGTTCGCTTC
GCGCCATCGG GTTACGGCTT TGAACGCCGC ATCGCGGGCG AATGGCAGCC GCTGCCGGGA
CGCCCCTTCG AACAGCGCAG CTGGCCCGCC GACGTGACCT TTTCGGCCGA GAGCGGGCAG
GGCGTCGCGC GCATCCTGTT CGATCGCGTC GGCACCAGCC CGACGCCGCA GACGGTCGTG
CTGTCGGGCG GCGACGCGCG CGAGATGGTG CGCGTGTCGG CGACGGGGGA GGTCAGCCGT
GGGCGCTGA
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| Protein sequence | MRIFAATAKL RARARPDANG FTLVELMVVL AIMALAATAV VLTIPGEERS VRSEADRLAA
RLAAARDVAV IEGRSVAVRF APSGYGFERR IAGEWQPLPG RPFEQRSWPA DVTFSAESGQ
GVARILFDRV GTSPTPQTVV LSGGDAREMV RVSATGEVSR GR
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