Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0318 |
Symbol | |
ID | 4082349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 327040 |
End bp | 327531 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638008677 |
Product | general secretion pathway protein G |
Protein accession | YP_615374 |
Protein GI | 103485813 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01710] general secretion pathway protein G [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGA TGCAGCTTTT TCTCCGCCTG ATGCTCGATA CCGGACGTCC GCCGGTTCAT CGTCGCCGTA AAAAGGGCGA GCGCGGCTTT ACGCTGACCG AGTTGATGGT CGTCATCTTC ATCATCGGCC TGCTCGCGAC GGTGGTGATG ATCAACGTCC TGCCCAGCCA GGACCGCGCG ATGGTGACCA AGGCGAAGGC CGATATTGCG ACGCTCGAAA CCGCGCTCGA ACAATATCGG CTCGACAATC TGACCTATCC GACGTCGACC GACGGGCTGA ATGCGCTTGT CACCGCGCCG CCCGCGCTCG CGCAGCCCGA ACGCTATCGC CGCGGCGGCT ATATCAGGAA GCTGCCCGAA GACCCGTGGG GCCGCCCCTA TAATTATCAG GCGCCCGGCC CGAACGGCAA GGCGTTCGAC GTCTGGTCGC TTGGCGCCGA CGGCGCCCCC GGCGGGACCG ACGAAAATGC GGATATTCGC GGCGACAGCT AA
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Protein sequence | MSLMQLFLRL MLDTGRPPVH RRRKKGERGF TLTELMVVIF IIGLLATVVM INVLPSQDRA MVTKAKADIA TLETALEQYR LDNLTYPTST DGLNALVTAP PALAQPERYR RGGYIRKLPE DPWGRPYNYQ APGPNGKAFD VWSLGADGAP GGTDENADIR GDS
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