Gene Sala_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0318 
Symbol 
ID4082349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp327040 
End bp327531 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID638008677 
Productgeneral secretion pathway protein G 
Protein accessionYP_615374 
Protein GI103485813 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA TGCAGCTTTT TCTCCGCCTG ATGCTCGATA CCGGACGTCC GCCGGTTCAT 
CGTCGCCGTA AAAAGGGCGA GCGCGGCTTT ACGCTGACCG AGTTGATGGT CGTCATCTTC
ATCATCGGCC TGCTCGCGAC GGTGGTGATG ATCAACGTCC TGCCCAGCCA GGACCGCGCG
ATGGTGACCA AGGCGAAGGC CGATATTGCG ACGCTCGAAA CCGCGCTCGA ACAATATCGG
CTCGACAATC TGACCTATCC GACGTCGACC GACGGGCTGA ATGCGCTTGT CACCGCGCCG
CCCGCGCTCG CGCAGCCCGA ACGCTATCGC CGCGGCGGCT ATATCAGGAA GCTGCCCGAA
GACCCGTGGG GCCGCCCCTA TAATTATCAG GCGCCCGGCC CGAACGGCAA GGCGTTCGAC
GTCTGGTCGC TTGGCGCCGA CGGCGCCCCC GGCGGGACCG ACGAAAATGC GGATATTCGC
GGCGACAGCT AA
 
Protein sequence
MSLMQLFLRL MLDTGRPPVH RRRKKGERGF TLTELMVVIF IIGLLATVVM INVLPSQDRA 
MVTKAKADIA TLETALEQYR LDNLTYPTST DGLNALVTAP PALAQPERYR RGGYIRKLPE
DPWGRPYNYQ APGPNGKAFD VWSLGADGAP GGTDENADIR GDS