Gene Sala_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0311 
Symbol 
ID4082874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp315471 
End bp316313 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID638008669 
ProductXRE family transcriptional regulator 
Protein accessionYP_615367 
Protein GI103485806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.679895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.664954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC GCCTCGGGCC CATGCTGAAG GCCATCCGCG AACGCGCGGG CATCGCGCAG 
CTCGAGCTGT CGCTGCGCAT GAATGTGTCG CAGCGCCACA TCAGCTTTGT CGAAAGCGGC
CGCTCGCGCC CGAGCCGCGA CCTGATCGGG GCATGGCTCG GCGAAACGGA CGCGCCGCCT
TCGCTGCGCA ATGCGGTGCT GCTCGCGGCC GGATACGCCC CCGCATCGCA CGATGTTTCG
CCGCGTGATC CACGGCTGGC GGTCGCGATC GCAGCGCTCG ACCGCACGCT GGACCTGCAC
GAACCCTATC CCGGCCTGGT TTTCGATGCC GACTGGCAGG CGCACCTCAC CAACCGGAGC
GCGCGGCGGC TGATGCGGCT GAACCTGCCC GATTTCGTTG CTGCGCTCGA TGATCTGTCG
CTGGGTTTCA GCATGATCGA CGCGCTGATC CATCCCGGCG GGATGTTCCG CTATATGCGT
GACCCGTGGA TCGGCGGCGG CGCGCTGCTC GACCAGCTGC GCCGCGAACA ATGGGTGCGC
CCCGCGATCG AGCCGCGCGC CGACCGGGTC GAGGCGTCGA TGATCGAACG CTTCGGCCCG
CGCCCACCGC AGCCGACGAA GCCTTCGGCC GATCCCTGTC TGAACCTGGT CTTTGATACG
CCGCAGGGGG TGATGCGCTT TTTCACGATC CAGAGCGTCT TTGCCTTGCC GCAGGATGTG
ACGCTGGCCT CGCTGCGCAT GGAATTGTGG TTCCCCGCCG ACGAGCCGAC GCGCGCGGCA
ATGCGGGCAC TCGCGAACAG CGAGGCTGCC CCTGGCGAGC CGCTGGTCAC CGTGAAGCCA
TAA
 
Protein sequence
MTSRLGPMLK AIRERAGIAQ LELSLRMNVS QRHISFVESG RSRPSRDLIG AWLGETDAPP 
SLRNAVLLAA GYAPASHDVS PRDPRLAVAI AALDRTLDLH EPYPGLVFDA DWQAHLTNRS
ARRLMRLNLP DFVAALDDLS LGFSMIDALI HPGGMFRYMR DPWIGGGALL DQLRREQWVR
PAIEPRADRV EASMIERFGP RPPQPTKPSA DPCLNLVFDT PQGVMRFFTI QSVFALPQDV
TLASLRMELW FPADEPTRAA MRALANSEAA PGEPLVTVKP