Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0311 |
Symbol | |
ID | 4082874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 315471 |
End bp | 316313 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638008669 |
Product | XRE family transcriptional regulator |
Protein accession | YP_615367 |
Protein GI | 103485806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.679895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.664954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC GCCTCGGGCC CATGCTGAAG GCCATCCGCG AACGCGCGGG CATCGCGCAG CTCGAGCTGT CGCTGCGCAT GAATGTGTCG CAGCGCCACA TCAGCTTTGT CGAAAGCGGC CGCTCGCGCC CGAGCCGCGA CCTGATCGGG GCATGGCTCG GCGAAACGGA CGCGCCGCCT TCGCTGCGCA ATGCGGTGCT GCTCGCGGCC GGATACGCCC CCGCATCGCA CGATGTTTCG CCGCGTGATC CACGGCTGGC GGTCGCGATC GCAGCGCTCG ACCGCACGCT GGACCTGCAC GAACCCTATC CCGGCCTGGT TTTCGATGCC GACTGGCAGG CGCACCTCAC CAACCGGAGC GCGCGGCGGC TGATGCGGCT GAACCTGCCC GATTTCGTTG CTGCGCTCGA TGATCTGTCG CTGGGTTTCA GCATGATCGA CGCGCTGATC CATCCCGGCG GGATGTTCCG CTATATGCGT GACCCGTGGA TCGGCGGCGG CGCGCTGCTC GACCAGCTGC GCCGCGAACA ATGGGTGCGC CCCGCGATCG AGCCGCGCGC CGACCGGGTC GAGGCGTCGA TGATCGAACG CTTCGGCCCG CGCCCACCGC AGCCGACGAA GCCTTCGGCC GATCCCTGTC TGAACCTGGT CTTTGATACG CCGCAGGGGG TGATGCGCTT TTTCACGATC CAGAGCGTCT TTGCCTTGCC GCAGGATGTG ACGCTGGCCT CGCTGCGCAT GGAATTGTGG TTCCCCGCCG ACGAGCCGAC GCGCGCGGCA ATGCGGGCAC TCGCGAACAG CGAGGCTGCC CCTGGCGAGC CGCTGGTCAC CGTGAAGCCA TAA
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Protein sequence | MTSRLGPMLK AIRERAGIAQ LELSLRMNVS QRHISFVESG RSRPSRDLIG AWLGETDAPP SLRNAVLLAA GYAPASHDVS PRDPRLAVAI AALDRTLDLH EPYPGLVFDA DWQAHLTNRS ARRLMRLNLP DFVAALDDLS LGFSMIDALI HPGGMFRYMR DPWIGGGALL DQLRREQWVR PAIEPRADRV EASMIERFGP RPPQPTKPSA DPCLNLVFDT PQGVMRFFTI QSVFALPQDV TLASLRMELW FPADEPTRAA MRALANSEAA PGEPLVTVKP
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