Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0304 |
Symbol | |
ID | 4082867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 303981 |
End bp | 306941 |
Gene Length | 2961 bp |
Protein Length | 986 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638008662 |
Product | beta-phosphoglucomutase |
Protein accession | YP_615360 |
Protein GI | 103485799 |
COG category | [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01990] beta-phosphoglucomutase [TIGR02009] beta-phosphoglucomutase family hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.337026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACCA TCGAACAGTC TCTGGAACCG ATGCGGCTCG TCCGGCGCGG AGCGGCGGGC GAAGACGCCA CCGCGCGGGC GCTGTTCGCA CTCGCCAACG GACTCGTCGG GGTCGAGGGC ATGGCCGACG AGCTCGCGGT CGCATCCTGC GCCTATCTGC CCGACGCCTA TATCCGCCGC CCGATCACCT ATCACGAGAG CTTCCCCGGC TATGCGAGCG CGACCGATAC GCGCATCGCC TGTCCGAGCC CGGTGCTGCT GCGGCTCGAG ATCGACGGGC GGGCGGTCGA TTTTGCCGCC GCCGACCTGC TCGACAGTGA AATCGCGCTC GACCTTGCGA GCGGGCAGGT GCAGCGCCGA TCGCGCTGGC GGCTTGCCGG TGGGCGCACG ATCGAGATCG CCGCCGAACG CATCGTCCCG CTGGATGGCG GCGCGCTCGT CGCCTCGCGC CTTCATATCC GCCCGGTCGA TTTCGGCGGC GCGGTCGCGG CATGGCTGAC CTATGGTTTC GACAGCGCCG CGCTCCACAA AGGCGATGCC GACGATCCGC GCATTTCGGG GCGCCTGCGC GCCCTGTGGC GCCTGACATC CCCCCTGCCG GGCGATGCTT CGTCGGTTAC GCGCTTCGCG CAGGATGCCG TCGAGCTTGC CTATCGCCAG CATGTCGCCT GTCCCGACGC CGCCGTCGCC GCGACCGAGG CGGGCCATGT CGTGCGCGGC GAACTGGTCG CCGGCGGCAC TCTGACGATC GACCGGGTGG TCGCGCTGGC CGCGGCCCGC GGTCGCCCGG TCGATCTTGC CGCGCTGGAC GATGGCGATG CCGATTTCGA TGCGCTCGCC GAGCGCCAGC GCGCAGCGGT GCAGCGATTG TGGGACGCCG CCGACCTCGC GATCGACGGC GACGATGCGC TGGCGGCGGC GCTGCGCTTC GACCTGTTCC AGCTCCACCA GTCGGCGAGC CGCGATCCGA ACCACAGCAT TGGCGCCAAG GGGCTGACCG GCGAGGGTTA TGAGGGTCAT TATTTCTGGG ACGCCGAAAC CTTCATGCTG CCGGTGCTCG CGTTGCAGGC GCCCGAAAAG GCGCGCGTGC TGATCGCCTA CCGGATCGGC AAGCTCGACG CCGCGCGCGC CCATGCCCGC GCGATCGGCC ATCGGAACGG CGCACTCTAT CCCTGGCGGA CGATCGGCGG CGACGAATGT TCGTCGCACT ATCCGACTGG GTCGGCGCAA TATCACATAA ATGGCGACAT CGCCTATGCG CTCGCGCTCG CTGTCGCGGC GACGGGCGAC GAGGCTTTGC GCGCCGAAGC CGCCGAGATG CTGTTCGAGA CGGCGCGCAT CTGGATGGAG ATCGGCGCCT TCGATCCGCG CCGCGGCGGC GCCTTCTGTA TCCATGGGGT CACCGGCCCC GATGAGTATT CGGCGCTGGT CGACAATGAT TTTTACACCA ATGCGATTGC GCGCCGCCAT CTGGCCTACG CCGCCGAAAC CGCCGATTGG CTCGCTGCGC GCGGCGATCC GGCGGCGGTG ACGCAGCGGA TCGGGCTCGA CGCCGCGGAG GTTGCCGAAT GGCGCCGCGC CGCCGACGCG ATGTGGCTGC CCGTCGATAG CGAGCTGGGC ATCAACCCGC AGGACGATGC CTTCCTCGGC CGCCCCGAAC TGCCGGGGCT GGCGCAGCGG GATGGCGAAG GCCCGCTGCT GATGCGCTAT CACCCGATGA TCCTCTTTCG CCACCGGGTC GCGAAGCAGG GCAATGTGGT GCAGGCGATG GCGATGGATC TGGTCGCCAT GCCGCTCGCG CAGCAACGGC GCAATCTCGA CTATTATACG CGCGTCACGA CGCATGATTC GACGCTGTCG TCGGTGTCCT TCGCGATCGC CGCGGCGCGG CTCGGCGACG AACCGGCAGC ATTGGACTTC ATGCGCGAAT GCGCGCTCGT CGACCTGGAG GATCGCCACG GCAACACATC GCACGGGCTG CACATGGCGG CGCTCGCGGG AAGCTGGCTG GTTCTGGCAG AGGGCTGGGG CGGGCTGCGC CTCGACGGCG CGGCGCCCGC GTTCCGGCCG CAGCTTCCCG CCGCATGGAC GGGGTATCGC TTCCGCCTGC AATGGCGGGG TAGCGTGATC GAAACAGCGG TCGACGCTGC GGGCGCGACC TATCGCCTGC TCGCGGGCGC GCCGCTGGAC ATCACCGACC ATGGCCGCGC GCTGACCGTC GGCGCCGATC GGGTCTTTGC CCCGCGCCCG GCGCTGAAGG GCGTGATCTT CGACCTCGAC GGCGTGCTCA CCGACACCGC CGAGGATCAT TATCAGGCGT GGCAGGCGCT CGCCGACGCG CACGGGCTGA CGTTCGACCG CGAAGCGAAC CATGCGCTGA AGGGCGTCGA TCGCGCCGGA TCGCTGCGGC TGATCCTCGA ACAAACGGGC AAGGCAGTCG AGCCGCCGAA GTTCGAGGCG ATGCTGGCGG AGAAAAACGC CACCTATGTC GCGCGGCTCC GGGGCTATTC GCCCGCCAAT TTGTTCGCTG GCGTCGAGCG GCTATTCGCT GCCCTGCGCG CCGCGGGACT GAAAATCGGC CTGGCTTCGG CCAGCCGTAA CGCGCGTGAC GTGGTGGCGC GGCTCGGCAT CGCCGATGCG TTCGATTTTA TCGCCGACGC GGGTGCGGTG ACGCACCCCA AGCCGGCGCC CGACATTTTC CTGGCCTGTG CCGATGGCAT GGGCCTGTCC CCGGACCAGT GCATCGGTGT CGAAGATGCG CGCGCCGGAA TAACGGCCAT CCATGCGGCG GGCATGGTGG CCATTGGCAT CGGGTCTGAA GAGGCGCTGC CCGATGCCGA CATTCACGTC CCCGCCATCG GCGACCTCAC GCTCGGTCAG ATCCTGTCGG CAGAACAGGA AACGGCCGCG CGCGGGCGCC GGACAGGCAG AACAGTCAAT GCGGAGGATT TGTCATGTTG A
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Protein sequence | MATIEQSLEP MRLVRRGAAG EDATARALFA LANGLVGVEG MADELAVASC AYLPDAYIRR PITYHESFPG YASATDTRIA CPSPVLLRLE IDGRAVDFAA ADLLDSEIAL DLASGQVQRR SRWRLAGGRT IEIAAERIVP LDGGALVASR LHIRPVDFGG AVAAWLTYGF DSAALHKGDA DDPRISGRLR ALWRLTSPLP GDASSVTRFA QDAVELAYRQ HVACPDAAVA ATEAGHVVRG ELVAGGTLTI DRVVALAAAR GRPVDLAALD DGDADFDALA ERQRAAVQRL WDAADLAIDG DDALAAALRF DLFQLHQSAS RDPNHSIGAK GLTGEGYEGH YFWDAETFML PVLALQAPEK ARVLIAYRIG KLDAARAHAR AIGHRNGALY PWRTIGGDEC SSHYPTGSAQ YHINGDIAYA LALAVAATGD EALRAEAAEM LFETARIWME IGAFDPRRGG AFCIHGVTGP DEYSALVDND FYTNAIARRH LAYAAETADW LAARGDPAAV TQRIGLDAAE VAEWRRAADA MWLPVDSELG INPQDDAFLG RPELPGLAQR DGEGPLLMRY HPMILFRHRV AKQGNVVQAM AMDLVAMPLA QQRRNLDYYT RVTTHDSTLS SVSFAIAAAR LGDEPAALDF MRECALVDLE DRHGNTSHGL HMAALAGSWL VLAEGWGGLR LDGAAPAFRP QLPAAWTGYR FRLQWRGSVI ETAVDAAGAT YRLLAGAPLD ITDHGRALTV GADRVFAPRP ALKGVIFDLD GVLTDTAEDH YQAWQALADA HGLTFDREAN HALKGVDRAG SLRLILEQTG KAVEPPKFEA MLAEKNATYV ARLRGYSPAN LFAGVERLFA ALRAAGLKIG LASASRNARD VVARLGIADA FDFIADAGAV THPKPAPDIF LACADGMGLS PDQCIGVEDA RAGITAIHAA GMVAIGIGSE EALPDADIHV PAIGDLTLGQ ILSAEQETAA RGRRTGRTVN AEDLSC
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