Gene Sala_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0304 
Symbol 
ID4082867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp303981 
End bp306941 
Gene Length2961 bp 
Protein Length986 aa 
Translation table11 
GC content69% 
IMG OID638008662 
Productbeta-phosphoglucomutase 
Protein accessionYP_615360 
Protein GI103485799 
COG category[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase
[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01990] beta-phosphoglucomutase
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.337026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCA TCGAACAGTC TCTGGAACCG ATGCGGCTCG TCCGGCGCGG AGCGGCGGGC 
GAAGACGCCA CCGCGCGGGC GCTGTTCGCA CTCGCCAACG GACTCGTCGG GGTCGAGGGC
ATGGCCGACG AGCTCGCGGT CGCATCCTGC GCCTATCTGC CCGACGCCTA TATCCGCCGC
CCGATCACCT ATCACGAGAG CTTCCCCGGC TATGCGAGCG CGACCGATAC GCGCATCGCC
TGTCCGAGCC CGGTGCTGCT GCGGCTCGAG ATCGACGGGC GGGCGGTCGA TTTTGCCGCC
GCCGACCTGC TCGACAGTGA AATCGCGCTC GACCTTGCGA GCGGGCAGGT GCAGCGCCGA
TCGCGCTGGC GGCTTGCCGG TGGGCGCACG ATCGAGATCG CCGCCGAACG CATCGTCCCG
CTGGATGGCG GCGCGCTCGT CGCCTCGCGC CTTCATATCC GCCCGGTCGA TTTCGGCGGC
GCGGTCGCGG CATGGCTGAC CTATGGTTTC GACAGCGCCG CGCTCCACAA AGGCGATGCC
GACGATCCGC GCATTTCGGG GCGCCTGCGC GCCCTGTGGC GCCTGACATC CCCCCTGCCG
GGCGATGCTT CGTCGGTTAC GCGCTTCGCG CAGGATGCCG TCGAGCTTGC CTATCGCCAG
CATGTCGCCT GTCCCGACGC CGCCGTCGCC GCGACCGAGG CGGGCCATGT CGTGCGCGGC
GAACTGGTCG CCGGCGGCAC TCTGACGATC GACCGGGTGG TCGCGCTGGC CGCGGCCCGC
GGTCGCCCGG TCGATCTTGC CGCGCTGGAC GATGGCGATG CCGATTTCGA TGCGCTCGCC
GAGCGCCAGC GCGCAGCGGT GCAGCGATTG TGGGACGCCG CCGACCTCGC GATCGACGGC
GACGATGCGC TGGCGGCGGC GCTGCGCTTC GACCTGTTCC AGCTCCACCA GTCGGCGAGC
CGCGATCCGA ACCACAGCAT TGGCGCCAAG GGGCTGACCG GCGAGGGTTA TGAGGGTCAT
TATTTCTGGG ACGCCGAAAC CTTCATGCTG CCGGTGCTCG CGTTGCAGGC GCCCGAAAAG
GCGCGCGTGC TGATCGCCTA CCGGATCGGC AAGCTCGACG CCGCGCGCGC CCATGCCCGC
GCGATCGGCC ATCGGAACGG CGCACTCTAT CCCTGGCGGA CGATCGGCGG CGACGAATGT
TCGTCGCACT ATCCGACTGG GTCGGCGCAA TATCACATAA ATGGCGACAT CGCCTATGCG
CTCGCGCTCG CTGTCGCGGC GACGGGCGAC GAGGCTTTGC GCGCCGAAGC CGCCGAGATG
CTGTTCGAGA CGGCGCGCAT CTGGATGGAG ATCGGCGCCT TCGATCCGCG CCGCGGCGGC
GCCTTCTGTA TCCATGGGGT CACCGGCCCC GATGAGTATT CGGCGCTGGT CGACAATGAT
TTTTACACCA ATGCGATTGC GCGCCGCCAT CTGGCCTACG CCGCCGAAAC CGCCGATTGG
CTCGCTGCGC GCGGCGATCC GGCGGCGGTG ACGCAGCGGA TCGGGCTCGA CGCCGCGGAG
GTTGCCGAAT GGCGCCGCGC CGCCGACGCG ATGTGGCTGC CCGTCGATAG CGAGCTGGGC
ATCAACCCGC AGGACGATGC CTTCCTCGGC CGCCCCGAAC TGCCGGGGCT GGCGCAGCGG
GATGGCGAAG GCCCGCTGCT GATGCGCTAT CACCCGATGA TCCTCTTTCG CCACCGGGTC
GCGAAGCAGG GCAATGTGGT GCAGGCGATG GCGATGGATC TGGTCGCCAT GCCGCTCGCG
CAGCAACGGC GCAATCTCGA CTATTATACG CGCGTCACGA CGCATGATTC GACGCTGTCG
TCGGTGTCCT TCGCGATCGC CGCGGCGCGG CTCGGCGACG AACCGGCAGC ATTGGACTTC
ATGCGCGAAT GCGCGCTCGT CGACCTGGAG GATCGCCACG GCAACACATC GCACGGGCTG
CACATGGCGG CGCTCGCGGG AAGCTGGCTG GTTCTGGCAG AGGGCTGGGG CGGGCTGCGC
CTCGACGGCG CGGCGCCCGC GTTCCGGCCG CAGCTTCCCG CCGCATGGAC GGGGTATCGC
TTCCGCCTGC AATGGCGGGG TAGCGTGATC GAAACAGCGG TCGACGCTGC GGGCGCGACC
TATCGCCTGC TCGCGGGCGC GCCGCTGGAC ATCACCGACC ATGGCCGCGC GCTGACCGTC
GGCGCCGATC GGGTCTTTGC CCCGCGCCCG GCGCTGAAGG GCGTGATCTT CGACCTCGAC
GGCGTGCTCA CCGACACCGC CGAGGATCAT TATCAGGCGT GGCAGGCGCT CGCCGACGCG
CACGGGCTGA CGTTCGACCG CGAAGCGAAC CATGCGCTGA AGGGCGTCGA TCGCGCCGGA
TCGCTGCGGC TGATCCTCGA ACAAACGGGC AAGGCAGTCG AGCCGCCGAA GTTCGAGGCG
ATGCTGGCGG AGAAAAACGC CACCTATGTC GCGCGGCTCC GGGGCTATTC GCCCGCCAAT
TTGTTCGCTG GCGTCGAGCG GCTATTCGCT GCCCTGCGCG CCGCGGGACT GAAAATCGGC
CTGGCTTCGG CCAGCCGTAA CGCGCGTGAC GTGGTGGCGC GGCTCGGCAT CGCCGATGCG
TTCGATTTTA TCGCCGACGC GGGTGCGGTG ACGCACCCCA AGCCGGCGCC CGACATTTTC
CTGGCCTGTG CCGATGGCAT GGGCCTGTCC CCGGACCAGT GCATCGGTGT CGAAGATGCG
CGCGCCGGAA TAACGGCCAT CCATGCGGCG GGCATGGTGG CCATTGGCAT CGGGTCTGAA
GAGGCGCTGC CCGATGCCGA CATTCACGTC CCCGCCATCG GCGACCTCAC GCTCGGTCAG
ATCCTGTCGG CAGAACAGGA AACGGCCGCG CGCGGGCGCC GGACAGGCAG AACAGTCAAT
GCGGAGGATT TGTCATGTTG A
 
Protein sequence
MATIEQSLEP MRLVRRGAAG EDATARALFA LANGLVGVEG MADELAVASC AYLPDAYIRR 
PITYHESFPG YASATDTRIA CPSPVLLRLE IDGRAVDFAA ADLLDSEIAL DLASGQVQRR
SRWRLAGGRT IEIAAERIVP LDGGALVASR LHIRPVDFGG AVAAWLTYGF DSAALHKGDA
DDPRISGRLR ALWRLTSPLP GDASSVTRFA QDAVELAYRQ HVACPDAAVA ATEAGHVVRG
ELVAGGTLTI DRVVALAAAR GRPVDLAALD DGDADFDALA ERQRAAVQRL WDAADLAIDG
DDALAAALRF DLFQLHQSAS RDPNHSIGAK GLTGEGYEGH YFWDAETFML PVLALQAPEK
ARVLIAYRIG KLDAARAHAR AIGHRNGALY PWRTIGGDEC SSHYPTGSAQ YHINGDIAYA
LALAVAATGD EALRAEAAEM LFETARIWME IGAFDPRRGG AFCIHGVTGP DEYSALVDND
FYTNAIARRH LAYAAETADW LAARGDPAAV TQRIGLDAAE VAEWRRAADA MWLPVDSELG
INPQDDAFLG RPELPGLAQR DGEGPLLMRY HPMILFRHRV AKQGNVVQAM AMDLVAMPLA
QQRRNLDYYT RVTTHDSTLS SVSFAIAAAR LGDEPAALDF MRECALVDLE DRHGNTSHGL
HMAALAGSWL VLAEGWGGLR LDGAAPAFRP QLPAAWTGYR FRLQWRGSVI ETAVDAAGAT
YRLLAGAPLD ITDHGRALTV GADRVFAPRP ALKGVIFDLD GVLTDTAEDH YQAWQALADA
HGLTFDREAN HALKGVDRAG SLRLILEQTG KAVEPPKFEA MLAEKNATYV ARLRGYSPAN
LFAGVERLFA ALRAAGLKIG LASASRNARD VVARLGIADA FDFIADAGAV THPKPAPDIF
LACADGMGLS PDQCIGVEDA RAGITAIHAA GMVAIGIGSE EALPDADIHV PAIGDLTLGQ
ILSAEQETAA RGRRTGRTVN AEDLSC